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G0HIV2 (G0HIV2_THES4) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL AEK72881.1
Gene names
Ordered Locus Names:GQS_04900
OrganismThermococcus sp. (strain CGMCC 1.5172 / 4557) [Complete proteome] [HAMAP] EMBL AEK72881.1
Taxonomic identifier1042877 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEK72881.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G0HIV2 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 65978EC7CD17E189

FASTA38044,044
        10         20         30         40         50         60 
MVSSGFNAML LKLGVPEDRL AVLEGKGGVV EGEFEGIRYV RFRDSAKGFR RGTVVFDNGD 

        70         80         90        100        110        120 
VVLGFPHIKR VVQLETGIKR VFKNKPFYVE EKVDGYNVRV VKVRGRVLAL TRGGFICPFT 

       130        140        150        160        170        180 
TERILDFINE EFFRDYPNLV LAGEMAGPES PYIVEGPPYV KEDIQFFLFD IQEKGTGRSL 

       190        200        210        220        230        240 
PVEERYRLAD EYGIRHVETF GLYDRSKIEE LHELIERLSR ERREGIVMKT PDMKRIAKYV 

       250        260        270        280        290        300 
TPYANVNDIR IGSHIFFDLP HGYFMGRIKR LAFYLAEKHV KGEEFDEYAK ALGKALLRPF 

       310        320        330        340        350        360 
VESIHEVANG GEVEEVFTVR VKNISTAHRM VTHFERLGVK IHIEDIEDLR NGYWRITFKR 

       370        380 
VYPDATREMR ELWNGRAFVD

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References

[1]"Complete genome sequence of Thermococcus sp. strain 4557, a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area."
Wang X., Gao Z., Xu X., Ruan L.
J. Bacteriol. 193:5544-5545(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CGMCC 1.5172 / 4557.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002920 Genomic DNA. Translation: AEK72881.1.
RefSeqYP_004762558.1. NC_015865.1.

3D structure databases

ProteinModelPortalG0HIV2.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK72881; AEK72881; GQS_04900.
GeneID11015650.
KEGGthe:GQS_04900.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.
OMAEEKMNGY.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0HIV2_THES4
AccessionPrimary (citable) accession number: G0HIV2
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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