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Protein
Submitted name:

ATP dependent DNA ligase

Gene

GQS_04900

Organism
Thermococcus sp. (strain CGMCC 1.5172 / 4557)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTSP1042877:GHEX-1001-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:GQS_04900Imported
OrganismiThermococcus sp. (strain CGMCC 1.5172 / 4557)Imported
Taxonomic identifieri1042877 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
ProteomesiUP000000874: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0HIV2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

G0HIV2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVSSGFNAML LKLGVPEDRL AVLEGKGGVV EGEFEGIRYV RFRDSAKGFR
60 70 80 90 100
RGTVVFDNGD VVLGFPHIKR VVQLETGIKR VFKNKPFYVE EKVDGYNVRV
110 120 130 140 150
VKVRGRVLAL TRGGFICPFT TERILDFINE EFFRDYPNLV LAGEMAGPES
160 170 180 190 200
PYIVEGPPYV KEDIQFFLFD IQEKGTGRSL PVEERYRLAD EYGIRHVETF
210 220 230 240 250
GLYDRSKIEE LHELIERLSR ERREGIVMKT PDMKRIAKYV TPYANVNDIR
260 270 280 290 300
IGSHIFFDLP HGYFMGRIKR LAFYLAEKHV KGEEFDEYAK ALGKALLRPF
310 320 330 340 350
VESIHEVANG GEVEEVFTVR VKNISTAHRM VTHFERLGVK IHIEDIEDLR
360 370 380
NGYWRITFKR VYPDATREMR ELWNGRAFVD
Length:380
Mass (Da):44,044
Last modified:October 19, 2011 - v1
Checksum:i65978EC7CD17E189
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002920 Genomic DNA. Translation: AEK72881.1.
RefSeqiWP_014012564.1. NC_015865.1.
YP_004762558.1. NC_015865.1.

Genome annotation databases

EnsemblBacteriaiAEK72881; AEK72881; GQS_04900.
GeneIDi11015650.
KEGGithe:GQS_04900.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002920 Genomic DNA. Translation: AEK72881.1.
RefSeqiWP_014012564.1. NC_015865.1.
YP_004762558.1. NC_015865.1.

3D structure databases

ProteinModelPortaliG0HIV2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEK72881; AEK72881; GQS_04900.
GeneIDi11015650.
KEGGithe:GQS_04900.

Phylogenomic databases

KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciTSP1042877:GHEX-1001-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Thermococcus sp. strain 4557, a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area."
    Wang X., Gao Z., Xu X., Ruan L.
    J. Bacteriol. 193:5544-5545(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CGMCC 1.5172 / 4557Imported.

Entry informationi

Entry nameiG0HIV2_THES4
AccessioniPrimary (citable) accession number: G0HIV2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 7, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.