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G0HI59 (G0HI59_CORVD) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
G0HI59 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: F8960CE61BB11480

FASTA46452,559
        10         20         30         40         50         60 
MSDLELNPLF ARTDEATSFP RHRIPEAGSL PETAYQLIHD EAMLDGNARM NLATFVGTWM 

        70         80         90        100        110        120 
DDHANRLYSE AFDKNMIDKD EYPATAEIED RCWRMIARLW NAPDPDHTMG TSTVGSSEAC 

       130        140        150        160        170        180 
MFGGLALKRR WQHRRRAAGE STERPNIVLS SAVQVCWEKF CNYFDVEPRY VPVSEEHRVL 

       190        200        210        220        230        240 
DGHDLDSYVD ENTIGVVAIL GVTYTGMYEP VAAIAAALDE IEDRRGLDIR IHVDAASGGM 

       250        260        270        280        290        300 
IAPFLQPDLE WDFRLPRVAS INTSGHKYGL VYPGLGWIVW RTQEDLPEDL VFRVSYLGGD 

       310        320        330        340        350        360 
MPTLALNFSR PGAQVLLQYY LFLQLGMDGY RRVQGTTMEV ARYLAGEIGK MPDFELWSED 

       370        380        390        400        410        420 
LDIPVFAWRL AGEDAWGDAR RERKWTLYDL SDRLRMHGWQ VPAYPMPDDL SDVTVQRIVV 

       430        440        450        460 
RNGMSHDLAT LFVRDLRTCV RYLDGLDAPL PSTADGGQGT GFHH 

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References

[1]"Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation."
Schroeder J., Maus I., Trost E., Tauch A.
BMC Genomics 12:545-545(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 44702 / JCM 12073 / NCIMB 30131.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002917 Genomic DNA. Translation: AEK38321.1.
RefSeqYP_004761394.1. NC_015859.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK38321; AEK38321; CVAR_2979.
GeneID11001786.
KEGGcva:CVAR_2979.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycCVAR858619:GHOU-3067-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0HI59_CORVD
AccessionPrimary (citable) accession number: G0HI59
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)