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Protein
Submitted name:

Superoxide dismutase

Gene

sodC

Organism
Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) (Corynebacterium mooreparkense)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutaseImported (EC:1.15.1.1Imported)
Gene namesi
Name:sodCImported
Ordered Locus Names:CVAR_1949Imported
OrganismiCorynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) (Corynebacterium mooreparkense)Imported
Taxonomic identifieri858619 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000006659 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_500340028526 – 206Sequence analysisAdd BLAST181

Interactioni

Protein-protein interaction databases

STRINGi858619.CVAR_1949.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 202Sod_CuInterPro annotationAdd BLAST152

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105IBG. Bacteria.
COG2032. LUCA.
KOiK04565.
OMAiDHSAGYH.
OrthoDBiPOG091H05EB.

Family and domain databases

CDDicd00305. Cu-Zn_Superoxide_Dismutase. 1 hit.
Gene3Di2.60.40.200. 1 hit.
InterProiIPR024134. SOD_Cu/Zn_/chaperone.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

G0HFP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLPTRSSAV AAAAATVLVL SACSSDDNDD GNTTDDASTT AYATADVTNA
60 70 80 90 100
DGDALGTASV SEDSFASDAT ELTVSFTGLE PGMYGMHIHT VGQCETDSES
110 120 130 140 150
PDGSDTGDYL SSGGHMDSDD HDHPSHGGDL PALLVKEDGT ASLTVSTDRV
160 170 180 190 200
TKENLLDDDG SALIIHESPD NYGNIPERYA PDGPDEDSLK TGDAGGRQAC

GVFEAA
Length:206
Mass (Da):21,092
Last modified:October 19, 2011 - v1
Checksum:i3C0AAB44A600E896
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002917 Genomic DNA. Translation: AEK37302.1.
RefSeqiWP_014010458.1. NC_015859.1.

Genome annotation databases

EnsemblBacteriaiAEK37302; AEK37302; CVAR_1949.
KEGGicva:CVAR_1949.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002917 Genomic DNA. Translation: AEK37302.1.
RefSeqiWP_014010458.1. NC_015859.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi858619.CVAR_1949.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEK37302; AEK37302; CVAR_1949.
KEGGicva:CVAR_1949.

Phylogenomic databases

eggNOGiENOG4105IBG. Bacteria.
COG2032. LUCA.
KOiK04565.
OMAiDHSAGYH.
OrthoDBiPOG091H05EB.

Family and domain databases

CDDicd00305. Cu-Zn_Superoxide_Dismutase. 1 hit.
Gene3Di2.60.40.200. 1 hit.
InterProiIPR024134. SOD_Cu/Zn_/chaperone.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiG0HFP9_CORVD
AccessioniPrimary (citable) accession number: G0HFP9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: November 2, 2016
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.