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G0GW23 (G0GW23_RICH0) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Tyrosine recombinase XerC HAMAP-Rule MF_01808
Gene names
Name:xerC HAMAP-Rule MF_01808 EMBL AEK75228.1
Ordered Locus Names:Rh054_06895 EMBL AEK75228.1
OrganismRickettsia heilongjiangensis (strain ATCC VR-1524 / 054) [Complete proteome] [HAMAP]
Taxonomic identifier1032845 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group ›

Protein attributes

Sequence length305 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids By similarity. HAMAP-Rule MF_01808

Subunit structure

Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD By similarity. HAMAP-Rule MF_01808

Subcellular location

Cytoplasm By similarity SAAS SAAS010998 HAMAP-Rule MF_01808.

Sequence similarities

Belongs to the 'phage' integrase family. XerC subfamily. HAMAP-Rule MF_01808

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1591 By similarity HAMAP-Rule MF_01808
Active site1821 By similarity HAMAP-Rule MF_01808
Active site2501 By similarity HAMAP-Rule MF_01808
Active site2531 By similarity HAMAP-Rule MF_01808
Active site2761 By similarity HAMAP-Rule MF_01808
Active site2851O-(3'-phospho-DNA)-tyrosine intermediate By similarity HAMAP-Rule MF_01808

Sequences

Sequence LengthMass (Da)Tools
G0GW23 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 945F4F61D5880823

FASTA30535,353
        10         20         30         40         50         60 
MLDTSIQALI NKWQKYLVLQ RNYSNHTAIS YNNDLKHFLE FMNYYNSELV TINHIKTADI 

        70         80         90        100        110        120 
RLIRSWLAKR NCDNFTASSI SRGLSAVKNF YRFLEKTTQL NSHIIFSIKS PKKTKLLPKA 

       130        140        150        160        170        180 
LSEDDVVISL EHIEEYGNVK WVELRNKALL VLIYASGLRI SEALSITKLH LQNLEFIRII 

       190        200        210        220        230        240 
GKGSKERIIP WLPIAKNLIT QYLEILPYKL GDNEPIFRGK QGKKLQPPVF NRELIKLKHF 

       250        260        270        280        290        300 
YGLPQHLTAH SFRHSFASHL LEHGADLRSL QELLGHKSLS TTQNYTKTSI KHLEAVYTTA 


YPIKK

« Hide

References

[1]"Complete genome sequence of Rickettsia heilongjiangensis, an emerging tick-transmitted human pathogen."
Duan C., Tong Y., Huang Y., Wang X., Xiong X., Wen B.
J. Bacteriol. 193:5564-5565(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1524 / 054.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002912 Genomic DNA. Translation: AEK75228.1.
RefSeqYP_004764906.1. NC_015866.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK75228; AEK75228; Rh054_06895.
GeneID11014539.
KEGGrhe:Rh054_06895.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03733.

Enzyme and pathway databases

BioCycRHEI1032845:GI4V-1230-MONOMER.

Family and domain databases

Gene3D1.10.150.130. 1 hit.
1.10.443.10. 1 hit.
HAMAPMF_01808. Recomb_XerC.
InterProIPR011010. DNA_brk_join_enz.
IPR013762. Integrase-like_cat-core.
IPR002104. Integrase_catalytic.
IPR010998. Integrase_Lambda-type_N.
IPR023109. Integrase_recombinase_N.
IPR004107. Integrase_SAM-like_N.
IPR023009. Tyrosine_recombinase_XerC/XerD.
[Graphical view]
PfamPF02899. Phage_integr_N. 1 hit.
PF00589. Phage_integrase. 1 hit.
[Graphical view]
SUPFAMSSF56349. DNA_brk_join_enz. 1 hit.
SSF47823. L_intgrse_like_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0GW23_RICH0
AccessionPrimary (citable) accession number: G0GW23
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info