Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

G0G9E1 (G0G9E1_AMYMS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length359 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEK41202.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G0G9E1 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 8B0926AAC0413864

FASTA35940,401
        10         20         30         40         50         60 
MPLPLQPPLK PMLAKPAKAI PESGGLLFEP KWDGFRCIVF RDGDELYLQS RAEKPLNRYF 

        70         80         90        100        110        120 
PEAVARLLDT LPPRVVLDGE LVVARDGRLN FDALTERIHP AESRITLLSA EQPAEFVAFD 

       130        140        150        160        170        180 
VLALGDDLLL DEPTSVRRER LTELAGDRFP LTPATTDPAT ARHWFELFEG AGLDGVIGKP 

       190        200        210        220        230        240 
LDEPYTPGKR VMLKYKHLRT ADCVLAGLRW HVDGGPGELV GSFLLGLYDE KGVLHHVGTV 

       250        260        270        280        290        300 
GAFPKDRRRE LAEELAPLIT DGEDHPWGGR ATGEAQRIPG GITRWRATEH EWVPLRPERV 

       310        320        330        340        350 
VEVAYENTEG GMPSRFRHNA RFKRWRPDRE PASCDYSQLE EPARYDLDAV FRGQVVRTR 

« Hide

References

« Hide 'large scale' references
[1]"Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S699 EMBL AEK41202.1.
[2]"Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S699 EMBL AFO76177.1.
[3]Biao T.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AFO76177.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002896 Genomic DNA. Translation: AEK41202.1.
CP003729 Genomic DNA. Translation: AFO76177.1.
RefSeqYP_005530659.1. NC_017186.1.
YP_006549122.1. NC_018266.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK41202; AEK41202; RAM_13570.
AFO76177; AFO76177; AMES_2641.
GeneID12123293.
13411701.
KEGGamm:AMES_2641.
amn:RAM_13570.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0G9E1_AMYMS
AccessionPrimary (citable) accession number: G0G9E1
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)