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G0G9C8

- G0G9C8_AMYMS

UniProt

G0G9C8 - G0G9C8_AMYMS

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
lig, AMES_2627, RAM_13495
Organism
Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
  2. ligase activity Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Name:ligImported
    Ordered Locus Names:AMES_2627Imported, RAM_13495Imported
    OrganismiAmycolatopsis mediterranei (strain S699) (Nocardia mediterranei)Imported
    Taxonomic identifieri713604 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
    ProteomesiUP000006138: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G0G9C8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPKNGDPVEY EVDGRTVRVT SPDKVYFPQR GITKRQVVEH YITVGAPLLR    50
    AIGERPTTLK RYVDGVEGEW FYAKRVPKGA PEWVSTAGIT FPSGRKAAEV 100
    CPTEPAVFAW AANLGTFDFH PWPVRRPDTD HPDELRIDVD PPDRAGFADA 150
    VEVAMVVREV LADAGLTGYP KTSGGRGVHV LVRIRPEWDF IAVRHAVIAL 200
    GREVARRIPE KATINWWKEE REGRVFLDYN QAARDRTVAS SWSVRGTPRA 250
    TVSTPLTWDL LGEVDADDFD VLTIPAFLEK HGDLHAPMDA SPFGLETALE 300
    WYERDERDHG LGELPYPPDY PKMPGEPKRV QPSKARPE 338
    Length:338
    Mass (Da):37,922
    Last modified:October 19, 2011 - v1
    Checksum:i262A5196A98D937B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002896 Genomic DNA. Translation: AEK41189.1.
    CP003729 Genomic DNA. Translation: AFO76163.1.
    RefSeqiYP_005530646.1. NC_017186.1.
    YP_006549108.1. NC_018266.1.

    Genome annotation databases

    EnsemblBacteriaiAEK41189; AEK41189; RAM_13495.
    AFO76163; AFO76163; AMES_2627.
    GeneIDi12123280.
    13411687.
    KEGGiamm:AMES_2627.
    amn:RAM_13495.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002896 Genomic DNA. Translation: AEK41189.1 .
    CP003729 Genomic DNA. Translation: AFO76163.1 .
    RefSeqi YP_005530646.1. NC_017186.1.
    YP_006549108.1. NC_018266.1.

    3D structure databases

    ModBasei Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEK41189 ; AEK41189 ; RAM_13495 .
    AFO76163 ; AFO76163 ; AMES_2627 .
    GeneIDi 12123280.
    13411687.
    KEGGi amm:AMES_2627.
    amn:RAM_13495.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. "Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
      Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
      J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S699Imported.
    2. "Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
      Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
      J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S699Imported.
    3. Biao T.
      Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: S699Imported.

    Entry informationi

    Entry nameiG0G9C8_AMYMS
    AccessioniPrimary (citable) accession number: G0G9C8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: April 16, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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