G0FTG4 (G0FTG4_AMYMD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AEK43851.1

Gene names

Name:	lig EMBL AFO78749.1
ORF Names:	AMES_5213 EMBL AFO78749.1, RAM_26870 EMBL AEK43851.1

Organism

Amycolatopsis mediterranei S699 EMBL AEK43851.1

Taxonomic identifier

713604 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis › Amycolatopsis mediterranei

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEK43851.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G0FTG4 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: C174075ADF45C78E	FASTA	355	39,715
	10 20 30 40 50 60 MADKLEEYRG KRARDRTSEP WPDGPPAPGD NDLFVIQEHH ATRLHWDFRL ERDGVLVSWA 70 80 90 100 110 120 VPKGLPLSPG VPRLAVHTED HPMEYLTFSG EIPAGEYGGG RMTVWDTGKY ETLHWNDHKV 130 140 150 160 170 180 EVVFHGERAR GKYLFTNRHD EDDRDWTLRR LDPAEPGHED APEFVEPMTA VPGELPADDD 190 200 210 220 230 240 EWAYEFAWGG LRTMLLVCGG RVTAHDETGA DVTARYPELH KLGEQLGSTE VLLDGEVVVV 250 260 270 280 290 300 KDGKPDPDGL DERRRADGAA AKRLKASCPV FYFASDVLHL EGRATLELPY TKRRELLDGL 310 320 330 340 350 PIEDRHWQVP RYYLGGGEAV AGASRQHGLP GVVAKRADSP YQPGGGPGDW LLIRN

References

[1]	"Whole Genome Sequence of the Rifamycin B-Producing Strain Amycolatopsis mediterranei S699." Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R. J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AEK43851.1.
[2]	"Complete Genome Sequence of Amycolatopsis mediterranei S699 Based on De Novo Assembly via a Combinatorial Sequencing Strategy." Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P. J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AFO78749.1.
[3]	Biao T. Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AFO78749.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002896 Genomic DNA. Translation: AEK43851.1. CP003729 Genomic DNA. Translation: AFO78749.1.
RefSeq	YP_005533308.1. NC_017186.1. YP_006551693.1. NC_018266.1.
3D structure databases
ProteinModelPortal	G0FTG4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEK43851; AEK43851; RAM_26870. AFO78749; AFO78749; AMES_5213.
GeneID	12119721. 13410248.
KEGG	amm:AMES_5213. amn:RAM_26870.
Phylogenomic databases
KO	K01971.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR014144. LigD_PE_domain. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G0FTG4_AMYMD

Accession

Primary (citable) accession number: G0FTG4

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)