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G0FQR0 (G0FQR0_AMYMS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length287 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEK43778.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G0FQR0 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: A6379CD8FD0973F5

FASTA28732,010
        10         20         30         40         50         60 
MKTSHPDKVF YPEDGLTKGD VVEYYRAVAD VMLPHLRGRP LTLRRFPDGI GKPGWFQKHP 

        70         80         90        100        110        120 
GEHFPDSIRV ERVPRRGGGT DEYVVCEDAA TLEYLANQGT VEFHVWLSTA DAPERPDRLV 

       130        140        150        160        170        180 
LDLDPPDGTP VTELRTVARR IRDHYERVGL TAFVQATGGR GFHVLAPLDA KSETDVVLEL 

       190        200        210        220        230        240 
SRALADRVAG DDPDRLTTAQ RKDQRGDRIF LDANRNGYAQ TFVAPYSLRA RPGAAAATPL 

       250        260        270        280 
DWRELGTADP AGWSLVKEKR RLARKEDPWR DLDEHAGSAE AALKQLG 

« Hide

References

« Hide 'large scale' references
[1]"Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S699 EMBL AEK43778.1.
[2]"Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S699 EMBL AFO78677.1.
[3]Biao T.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AFO78677.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002896 Genomic DNA. Translation: AEK43778.1.
CP003729 Genomic DNA. Translation: AFO78677.1.
RefSeqYP_005533235.1. NC_017186.1.
YP_006551622.1. NC_018266.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK43778; AEK43778; RAM_26505.
AFO78677; AFO78677; AMES_5141.
GeneID12123929.
13410096.
KEGGamm:AMES_5141.
amn:RAM_26505.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0FQR0_AMYMS
AccessionPrimary (citable) accession number: G0FQR0
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)