G0FQR0 (G0FQR0_AMYMD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AEK43778.1

Gene names

Name:	lig EMBL AFO78677.1
ORF Names:	AMES_5141 EMBL AFO78677.1, RAM_26505 EMBL AEK43778.1

Organism

Amycolatopsis mediterranei S699 EMBL AEK43778.1

Taxonomic identifier

713604 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis › Amycolatopsis mediterranei

Protein attributes

Sequence length	287 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEK43778.1
Gene Ontology (GO)
Molecular_function	ligase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G0FQR0 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: A6379CD8FD0973F5	FASTA	287	32,010
	10 20 30 40 50 60 MKTSHPDKVF YPEDGLTKGD VVEYYRAVAD VMLPHLRGRP LTLRRFPDGI GKPGWFQKHP 70 80 90 100 110 120 GEHFPDSIRV ERVPRRGGGT DEYVVCEDAA TLEYLANQGT VEFHVWLSTA DAPERPDRLV 130 140 150 160 170 180 LDLDPPDGTP VTELRTVARR IRDHYERVGL TAFVQATGGR GFHVLAPLDA KSETDVVLEL 190 200 210 220 230 240 SRALADRVAG DDPDRLTTAQ RKDQRGDRIF LDANRNGYAQ TFVAPYSLRA RPGAAAATPL 250 260 270 280 DWRELGTADP AGWSLVKEKR RLARKEDPWR DLDEHAGSAE AALKQLG

References

[1]	"Whole Genome Sequence of the Rifamycin B-Producing Strain Amycolatopsis mediterranei S699." Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R. J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AEK43778.1.
[2]	"Complete Genome Sequence of Amycolatopsis mediterranei S699 Based on De Novo Assembly via a Combinatorial Sequencing Strategy." Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P. J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AFO78677.1.
[3]	Biao T. Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AFO78677.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002896 Genomic DNA. Translation: AEK43778.1. CP003729 Genomic DNA. Translation: AFO78677.1.
RefSeq	YP_005533235.1. NC_017186.1. YP_006551622.1. NC_018266.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEK43778; AEK43778; RAM_26505. AFO78677; AFO78677; AMES_5141.
GeneID	12123929. 13410096.
KEGG	amm:AMES_5141. amn:RAM_26505.
Phylogenomic databases
KO	K01971.
Family and domain databases
InterPro	IPR014145. LigD_pol. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G0FQR0_AMYMD

Accession

Primary (citable) accession number: G0FQR0

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)