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G0FQR0

- G0FQR0_AMYMS

UniProt

G0FQR0 - G0FQR0_AMYMS

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

lig

Organism
Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ligase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Name:ligImported
    Ordered Locus Names:AMES_5141Imported, RAM_26505Imported
    OrganismiAmycolatopsis mediterranei (strain S699) (Nocardia mediterranei)Imported
    Taxonomic identifieri713604 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
    ProteomesiUP000006138: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    InterProiIPR014145. LigD_pol.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G0FQR0-1 [UniParc]FASTAAdd to Basket

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    MKTSHPDKVF YPEDGLTKGD VVEYYRAVAD VMLPHLRGRP LTLRRFPDGI    50
    GKPGWFQKHP GEHFPDSIRV ERVPRRGGGT DEYVVCEDAA TLEYLANQGT 100
    VEFHVWLSTA DAPERPDRLV LDLDPPDGTP VTELRTVARR IRDHYERVGL 150
    TAFVQATGGR GFHVLAPLDA KSETDVVLEL SRALADRVAG DDPDRLTTAQ 200
    RKDQRGDRIF LDANRNGYAQ TFVAPYSLRA RPGAAAATPL DWRELGTADP 250
    AGWSLVKEKR RLARKEDPWR DLDEHAGSAE AALKQLG 287
    Length:287
    Mass (Da):32,010
    Last modified:October 19, 2011 - v1
    Checksum:iA6379CD8FD0973F5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002896 Genomic DNA. Translation: AEK43778.1.
    CP003729 Genomic DNA. Translation: AFO78677.1.
    RefSeqiYP_005533235.1. NC_017186.1.
    YP_006551622.1. NC_018266.1.

    Genome annotation databases

    EnsemblBacteriaiAEK43778; AEK43778; RAM_26505.
    AFO78677; AFO78677; AMES_5141.
    GeneIDi12123929.
    13410096.
    KEGGiamm:AMES_5141.
    amn:RAM_26505.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002896 Genomic DNA. Translation: AEK43778.1 .
    CP003729 Genomic DNA. Translation: AFO78677.1 .
    RefSeqi YP_005533235.1. NC_017186.1.
    YP_006551622.1. NC_018266.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEK43778 ; AEK43778 ; RAM_26505 .
    AFO78677 ; AFO78677 ; AMES_5141 .
    GeneIDi 12123929.
    13410096.
    KEGGi amm:AMES_5141.
    amn:RAM_26505.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    InterProi IPR014145. LigD_pol.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
      Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
      J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S699Imported.
    2. "Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
      Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
      J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S699Imported.
    3. Biao T.
      Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: S699Imported.

    Entry informationi

    Entry nameiG0FQR0_AMYMS
    AccessioniPrimary (citable) accession number: G0FQR0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3