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G0FQR0

- G0FQR0_AMYMS

UniProt

G0FQR0 - G0FQR0_AMYMS

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

lig

Organism
Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Name:ligImported
Ordered Locus Names:AMES_5141Imported, RAM_26505Imported
OrganismiAmycolatopsis mediterranei (strain S699) (Nocardia mediterranei)Imported
Taxonomic identifieri713604 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000006138: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

G0FQR0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MKTSHPDKVF YPEDGLTKGD VVEYYRAVAD VMLPHLRGRP LTLRRFPDGI
60 70 80 90 100
GKPGWFQKHP GEHFPDSIRV ERVPRRGGGT DEYVVCEDAA TLEYLANQGT
110 120 130 140 150
VEFHVWLSTA DAPERPDRLV LDLDPPDGTP VTELRTVARR IRDHYERVGL
160 170 180 190 200
TAFVQATGGR GFHVLAPLDA KSETDVVLEL SRALADRVAG DDPDRLTTAQ
210 220 230 240 250
RKDQRGDRIF LDANRNGYAQ TFVAPYSLRA RPGAAAATPL DWRELGTADP
260 270 280
AGWSLVKEKR RLARKEDPWR DLDEHAGSAE AALKQLG
Length:287
Mass (Da):32,010
Last modified:October 19, 2011 - v1
Checksum:iA6379CD8FD0973F5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002896 Genomic DNA. Translation: AEK43778.1.
CP003729 Genomic DNA. Translation: AFO78677.1.
RefSeqiYP_005533235.1. NC_017186.1.
YP_006551622.1. NC_018266.1.

Genome annotation databases

EnsemblBacteriaiAEK43778; AEK43778; RAM_26505.
AFO78677; AFO78677; AMES_5141.
GeneIDi12123929.
13410096.
KEGGiamm:AMES_5141.
amn:RAM_26505.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002896 Genomic DNA. Translation: AEK43778.1 .
CP003729 Genomic DNA. Translation: AFO78677.1 .
RefSeqi YP_005533235.1. NC_017186.1.
YP_006551622.1. NC_018266.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEK43778 ; AEK43778 ; RAM_26505 .
AFO78677 ; AFO78677 ; AMES_5141 .
GeneIDi 12123929.
13410096.
KEGGi amm:AMES_5141.
amn:RAM_26505.

Phylogenomic databases

KOi K01971.

Family and domain databases

InterProi IPR014145. LigD_pol.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
    Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
    J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S699Imported.
  2. "Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
    Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
    J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S699Imported.
  3. Biao T.
    Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: S699Imported.

Entry informationi

Entry nameiG0FQR0_AMYMS
AccessioniPrimary (citable) accession number: G0FQR0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: October 1, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3