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Protein
Submitted name:

Elongation factor Tu

Gene

RAM_21475

Organism
Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Elongation factorImported, HydrolaseImported

Keywords - Biological processi

Protein biosynthesis

Names & Taxonomyi

Protein namesi
Submitted name:
Elongation factor TuImported (EC:3.6.5.3Imported)
Gene namesi
Ordered Locus Names:RAM_21475Imported
OrganismiAmycolatopsis mediterranei (strain S699) (Nocardia mediterranei)Imported
Taxonomic identifieri713604 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000006138 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliG0FQE2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.

Sequencei

Sequence statusi: Complete.

G0FQE2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKQQYVRTK PHLNIGTMGH VDHGKTTLTA AITKVLAEQG GTNRYVAFDR
60 70 80 90 100
IDRAPEEVER GITINIAHVE YETPTRHYAH VDMPGHADYV KNMITGAAQL
110 120 130 140 150
DGAVLVVSAQ DGAMPQTREH VVLARRIGVG HLVVALNKAD LADDEELLDL
160 170 180 190 200
VELEVRELLT RYGFDGDAVP VVRVSGLRAL EGDPRWTQRI LDLLAAVDEH
210 220 230 240 250
VPIPPRRLDL PFLMPIENVL TITGRGTVVT GAVEQGTLTV GDAVEVIGLG
260 270 280 290 300
PAVTSVATGL ETFGKPMDRA EAGDNAAVLL RGVKRGEVRR GQVVCLPGSV
310 320 330 340 350
RPHRRFRADV HVLSAAEGGR RTPFAANYRP QFHFRTSDVV GVVTLADGVT
360 370 380 390
AVRPGDVASL TVELGQPVAM SPGLGFAMRE GRLTVAAGTV REVLD
Length:395
Mass (Da):42,507
Last modified:October 19, 2011 - v1
Checksum:iE35CB3BAFE01E9B3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002896 Genomic DNA. Translation: AEK42775.1.
RefSeqiWP_013226063.1. NC_018266.1.
YP_005532232.1. NC_017186.1.
YP_006550647.1. NC_018266.1.

Genome annotation databases

EnsemblBacteriaiAEK42775; AEK42775; RAM_21475.
AFO77702; AFO77702; AMES_4166.
KEGGiamm:AMES_4166.
amn:RAM_21475.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002896 Genomic DNA. Translation: AEK42775.1.
RefSeqiWP_013226063.1. NC_018266.1.
YP_005532232.1. NC_017186.1.
YP_006550647.1. NC_018266.1.

3D structure databases

ProteinModelPortaliG0FQE2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEK42775; AEK42775; RAM_21475.
AFO77702; AFO77702; AMES_4166.
KEGGiamm:AMES_4166.
amn:RAM_21475.

Phylogenomic databases

KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
    Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
    J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S699Imported.

Entry informationi

Entry nameiG0FQE2_AMYMS
AccessioniPrimary (citable) accession number: G0FQE2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 27, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.