Skip Header

Contribute Send feedback
Read comments (?) or add your own

G0FQE2 (G0FQE2_AMYMD) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tufA EMBL AFO77702.1
Synonyms:tuf HAMAP-Rule MF_00118
ORF Names:AMES_4166 EMBL AFO77702.1, RAM_21475 EMBL AEK42775.1
OrganismAmycolatopsis mediterranei S699 EMBL AEK42775.1
Taxonomic identifier713604 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis ›

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
G0FQE2 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: E35CB3BAFE01E9B3

FASTA39542,507
        10         20         30         40         50         60 
MTKQQYVRTK PHLNIGTMGH VDHGKTTLTA AITKVLAEQG GTNRYVAFDR IDRAPEEVER 

        70         80         90        100        110        120 
GITINIAHVE YETPTRHYAH VDMPGHADYV KNMITGAAQL DGAVLVVSAQ DGAMPQTREH 

       130        140        150        160        170        180 
VVLARRIGVG HLVVALNKAD LADDEELLDL VELEVRELLT RYGFDGDAVP VVRVSGLRAL 

       190        200        210        220        230        240 
EGDPRWTQRI LDLLAAVDEH VPIPPRRLDL PFLMPIENVL TITGRGTVVT GAVEQGTLTV 

       250        260        270        280        290        300 
GDAVEVIGLG PAVTSVATGL ETFGKPMDRA EAGDNAAVLL RGVKRGEVRR GQVVCLPGSV 

       310        320        330        340        350        360 
RPHRRFRADV HVLSAAEGGR RTPFAANYRP QFHFRTSDVV GVVTLADGVT AVRPGDVASL 

       370        380        390 
TVELGQPVAM SPGLGFAMRE GRLTVAAGTV REVLD

« Hide

References

[1]"Whole Genome Sequence of the Rifamycin B-Producing Strain Amycolatopsis mediterranei S699."
Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AEK42775.1.
[2]"Complete Genome Sequence of Amycolatopsis mediterranei S699 Based on De Novo Assembly via a Combinatorial Sequencing Strategy."
Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AFO77702.1.
[3]Biao T.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AFO77702.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002896 Genomic DNA. Translation: AEK42775.1.
CP003729 Genomic DNA. Translation: AFO77702.1.
RefSeqYP_005532232.1. NC_017186.1.
YP_006550647.1. NC_018266.1.

3D structure databases

ProteinModelPortalG0FQE2.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK42775; AEK42775; RAM_21475.
AFO77702; AFO77702; AMES_4166.
GeneID12124868.
13415170.
KEGGamm:AMES_4166.
amn:RAM_21475.

Phylogenomic databases

KOK02358.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0FQE2_AMYMD
AccessionPrimary (citable) accession number: G0FQE2
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info