G0FQB4 (G0FQB4_AMYMD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AEK42747.1

Gene names

Name:	lig EMBL AFO77675.1
ORF Names:	AMES_4139 EMBL AFO77675.1, RAM_21335 EMBL AEK42747.1

Organism

Amycolatopsis mediterranei S699 EMBL AEK42747.1

Taxonomic identifier

713604 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis › Amycolatopsis mediterranei

Protein attributes

Sequence length	525 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEK42747.1
Gene Ontology (GO)
Molecular_function	ligase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G0FQB4 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: CF44701802AC6596	FASTA	525	58,634
	10 20 30 40 50 60 MAADPARKLR RYQEMRDFGR TAEPAGGSAG PDGHRFVVQR HRARRLHYDF RLELGGVLVS 70 80 90 100 110 120 WAVPKGPTLD PKARRLAVHV EDHPIEYAGF EGVIPRGEYG GGDVIVWDRG VWRPVEPDPA 130 140 150 160 170 180 RAIEAGTLHF DLEGEKLAGR FVLVRTSRGE KDQWFLLHKQ DEHAQAGWDA EDHPRSVKSG 190 200 210 220 230 240 RTNDEVAAAP DALWHGDRPA AEAEESVGGW QAPTEDELAA LDALGVKGRW SVAGRELALT 250 260 270 280 290 300 NLDKVLFPAA GGGKPVTKRD LIRYYATVGP VMLPYLAGRP LNTHRFPQGV TEPGFWQKEV 310 320 330 340 350 360 PRHAPDWLTT WRNERAEPGE SRRYVVADSV ATLAWLANYG ALELHAWTSR AADVDHPTWV 370 380 390 400 410 420 LFDIDPGPET TFEEVLELAR LHRTALEHLG LTGRPKVTGQ RGIQVWVPIA PHCTFEQTRA 430 440 450 460 470 480 WAETVSRTIG RVLPDLVSWA WTKDKRRGRA RLDYTQNVLN KTLVAPYSVR PRPGAPVSVP 490 500 510 520 LEWAELDDPR LAPDRWTIRD VPGRLAEHGD PFSVLLGLEQ KLPGL

References

[1]	"Whole Genome Sequence of the Rifamycin B-Producing Strain Amycolatopsis mediterranei S699." Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R. J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AEK42747.1.
[2]	"Complete Genome Sequence of Amycolatopsis mediterranei S699 Based on De Novo Assembly via a Combinatorial Sequencing Strategy." Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P. J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AFO77675.1.
[3]	Biao T. Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AFO77675.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002896 Genomic DNA. Translation: AEK42747.1. CP003729 Genomic DNA. Translation: AFO77675.1.
RefSeq	YP_005532204.1. NC_017186.1. YP_006550620.1. NC_018266.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEK42747; AEK42747; RAM_21335. AFO77675; AFO77675; AMES_4139.
GeneID	12124840. 13415143.
KEGG	amm:AMES_4139. amn:RAM_21335.
Phylogenomic databases
KO	K01971.
Family and domain databases
InterPro	IPR014144. LigD_PE_domain. IPR014145. LigD_pol. [Graphical view]
Pfam	PF13298. LigD_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G0FQB4_AMYMD

Accession

Primary (citable) accession number: G0FQB4

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)