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G0FQB4 (G0FQB4_AMYMS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length525 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEK42747.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G0FQB4 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: CF44701802AC6596

FASTA52558,634
        10         20         30         40         50         60 
MAADPARKLR RYQEMRDFGR TAEPAGGSAG PDGHRFVVQR HRARRLHYDF RLELGGVLVS 

        70         80         90        100        110        120 
WAVPKGPTLD PKARRLAVHV EDHPIEYAGF EGVIPRGEYG GGDVIVWDRG VWRPVEPDPA 

       130        140        150        160        170        180 
RAIEAGTLHF DLEGEKLAGR FVLVRTSRGE KDQWFLLHKQ DEHAQAGWDA EDHPRSVKSG 

       190        200        210        220        230        240 
RTNDEVAAAP DALWHGDRPA AEAEESVGGW QAPTEDELAA LDALGVKGRW SVAGRELALT 

       250        260        270        280        290        300 
NLDKVLFPAA GGGKPVTKRD LIRYYATVGP VMLPYLAGRP LNTHRFPQGV TEPGFWQKEV 

       310        320        330        340        350        360 
PRHAPDWLTT WRNERAEPGE SRRYVVADSV ATLAWLANYG ALELHAWTSR AADVDHPTWV 

       370        380        390        400        410        420 
LFDIDPGPET TFEEVLELAR LHRTALEHLG LTGRPKVTGQ RGIQVWVPIA PHCTFEQTRA 

       430        440        450        460        470        480 
WAETVSRTIG RVLPDLVSWA WTKDKRRGRA RLDYTQNVLN KTLVAPYSVR PRPGAPVSVP 

       490        500        510        520 
LEWAELDDPR LAPDRWTIRD VPGRLAEHGD PFSVLLGLEQ KLPGL 

« Hide

References

« Hide 'large scale' references
[1]"Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S699 EMBL AEK42747.1.
[2]"Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S699 EMBL AFO77675.1.
[3]Biao T.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AFO77675.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002896 Genomic DNA. Translation: AEK42747.1.
CP003729 Genomic DNA. Translation: AFO77675.1.
RefSeqYP_005532204.1. NC_017186.1.
YP_006550620.1. NC_018266.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK42747; AEK42747; RAM_21335.
AFO77675; AFO77675; AMES_4139.
GeneID12124840.
13415143.
KEGGamm:AMES_4139.
amn:RAM_21335.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
[Graphical view]
PfamPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0FQB4_AMYMS
AccessionPrimary (citable) accession number: G0FQB4
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)