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Protein
Submitted name:

Neuraminidase

Gene

RAM_21175

Organism
Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
NeuraminidaseImported
Gene namesi
Ordered Locus Names:RAM_21175Imported
OrganismiAmycolatopsis mediterranei (strain S699) (Nocardia mediterranei)Imported
Taxonomic identifieri713604 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000006138 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

G0FQ82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKITRLAQGL LAGLLGCAAL AVPAAIGAAT AQADVASTLV FNKDTEGHDC
60 70 80 90 100
YRIPTIVKAN NGDLLAFAEG RNGGAHACAD LGKIDLVMKR STDGGKTWGA
110 120 130 140 150
LNTVITAFGD TKGNPAPIVI PGSDRIVLLS TMQCYTNPDC GRIPRVSISE
160 170 180 190 200
DNGKTWGAPK TLTTELGFSA APGWLATGPS HGIVLTRGAH KGRLVAGMSY
210 220 230 240 250
SNIGALVYSD DKGSTWHLGA TDKPTTSAMN PQEISVTELR DGRIYAAARN
260 270 280 290 300
QANDGNKCLE DGTHNRAFAI SSDDGATFSS KFDFATDLVA PTVEGSTARM
310 320 330 340 350
SATDTGGKYN RILFAAPSVC GEREGLRVHS SFDEGANWTG TAGSLLVWGQ
360 370 380 390 400
GAAYSDMVQL SQSSVGVLFE VGPTEHPYDA IRFAAVSDAA LGAPACGGGY
410 420 430 440 450
SVIDSAPLGT GGAAGTVYLS YNAANGQNCV STMKNASAGT ATATAAYLEV
460 470 480 490
KGSARQTDSG SFSYFAGPVK ATAADKCVKW GGAAGGQVYD SQFEHCS
Length:497
Mass (Da):51,072
Last modified:October 19, 2011 - v1
Checksum:iB4D82DF45D3F53B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002896 Genomic DNA. Translation: AEK42715.1.
RefSeqiWP_013226006.1. NC_018266.1.
YP_005532172.1. NC_017186.1.
YP_006550590.1. NC_018266.1.

Genome annotation databases

EnsemblBacteriaiAEK42715; AEK42715; RAM_21175.
AFO77645; AFO77645; AMES_4109.
KEGGiamm:AMES_4109.
amn:RAM_21175.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002896 Genomic DNA. Translation: AEK42715.1.
RefSeqiWP_013226006.1. NC_018266.1.
YP_005532172.1. NC_017186.1.
YP_006550590.1. NC_018266.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEK42715; AEK42715; RAM_21175.
AFO77645; AFO77645; AMES_4109.
KEGGiamm:AMES_4109.
amn:RAM_21175.

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
    Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
    J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S699Imported.

Entry informationi

Entry nameiG0FQ82_AMYMS
AccessioniPrimary (citable) accession number: G0FQ82
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 27, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.