G0FQ74 (G0FQ74_AMYMD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AEK42707.1

Gene names

Name:	lig EMBL AFO77637.1
ORF Names:	AMES_4101 EMBL AFO77637.1, RAM_21135 EMBL AEK42707.1

Organism

Amycolatopsis mediterranei S699 EMBL AEK42707.1

Taxonomic identifier

713604 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis › Amycolatopsis mediterranei

Protein attributes

Sequence length	334 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEK42707.1
Gene Ontology (GO)
Molecular_function	DNA primase activity Inferred from electronic annotation. Source: InterPro ligase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G0FQ74 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: 5764DCC71A33103B	FASTA	334	36,920
	10 20 30 40 50 60 MSGAVLLDVD GVEVKISSPD KVYFPERGET KLDLVEYYRA ISGPLLARLG GRPLLLERYP 70 80 90 100 110 120 DGAGGKNWFQ KRVPKGTPPW LTTTVVSTPN GTTSDALVAK DLAHLLWAVN LGCLGFHVWP 130 140 150 160 170 180 YLADTPEVTD ELRVDLDPSP GIGFDELREA AVLTREFLAE HGIEGHLKTS GSRGLHLYVL 190 200 210 220 230 240 LEPRWDSFQV RAAAVALARA LERRHPEKIT AQWWKEERGS RVFVDFNQNA PHKTVFGTWC 250 260 270 280 290 300 VRPRVGGQVS TPIGWDELDT VEPDTLTLST VPARVAERGD PWAGAGERPQ SIEPLLAMSE 310 320 330 RDMADGLMDA PWPPVYPKMP NEPPRVAPSR AKKA

References

[1]	"Whole Genome Sequence of the Rifamycin B-Producing Strain Amycolatopsis mediterranei S699." Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R. J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AEK42707.1.
[2]	"Complete Genome Sequence of Amycolatopsis mediterranei S699 Based on De Novo Assembly via a Combinatorial Sequencing Strategy." Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P. J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AFO77637.1.
[3]	Biao T. Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: S699 EMBL AFO77637.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002896 Genomic DNA. Translation: AEK42707.1. CP003729 Genomic DNA. Translation: AFO77637.1.
RefSeq	YP_005532164.1. NC_017186.1. YP_006550582.1. NC_018266.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEK42707; AEK42707; RAM_21135. AFO77637; AFO77637; AMES_4101.
GeneID	12124800. 13415105.
KEGG	amm:AMES_4101. amn:RAM_21135.
Phylogenomic databases
KO	K01971.
Family and domain databases
InterPro	IPR002755. DNA_primase_S. IPR014145. LigD_pol. [Graphical view]
Pfam	PF01896. DNA_primase_S. 1 hit. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G0FQ74_AMYMD

Accession

Primary (citable) accession number: G0FQ74

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)