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G0FMN1 (G0FMN1_AMYMS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length314 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEK43176.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA primase activity

Inferred from electronic annotation. Source: InterPro

ligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G0FMN1 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 16DA3AE02B549F3A

FASTA31435,643
        10         20         30         40         50         60 
MADKAVELEV GHRTVRISNP DRVYFPARGE TKLDLVNYYL SVGDGIVNAL RERPCMLHRF 

        70         80         90        100        110        120 
PSGVAGEKVH QKRVPNGAPP WLETVRVTFP RYNRHADELC VTELAHVAWA VQMSTVEFHP 

       130        140        150        160        170        180 
WNSRRADTEK PDEWRIDLDP MPDCGFDRVR RVAHVAHEIL DELGAVGWPK TSGGRGLHIY 

       190        200        210        220        230        240 
VRIEPRWGFT DVRRAALAFA HEVERRAPDD VTTTWWRKDR DPRLLFVDYN QNARDHTIAS 

       250        260        270        280        290        300 
AYSVRGNPEG TVSTPIRWTE IDDAEPGDFT IATVPARFAE VGDLHAGMDD AVFSLDPLLE 

       310 
WADRDGVEEP PEPA 

« Hide

References

« Hide 'large scale' references
[1]"Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S699 EMBL AEK43176.1.
[2]"Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S699 EMBL AFO78093.1.
[3]Biao T.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AFO78093.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002896 Genomic DNA. Translation: AEK43176.1.
CP003729 Genomic DNA. Translation: AFO78093.1.
RefSeqYP_005532633.1. NC_017186.1.
YP_006551038.1. NC_018266.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK43176; AEK43176; RAM_23480.
AFO78093; AFO78093; AMES_4557.
GeneID12125269.
13407973.
KEGGamm:AMES_4557.
amn:RAM_23480.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0FMN1_AMYMS
AccessionPrimary (citable) accession number: G0FMN1
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)