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G0FMN1

- G0FMN1_AMYMS

UniProt

G0FMN1 - G0FMN1_AMYMS

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

lig

Organism
Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
  2. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Name:ligImported
Ordered Locus Names:AMES_4557Imported, RAM_23480Imported
OrganismiAmycolatopsis mediterranei (strain S699) (Nocardia mediterranei)Imported
Taxonomic identifieri713604 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000006138: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

G0FMN1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MADKAVELEV GHRTVRISNP DRVYFPARGE TKLDLVNYYL SVGDGIVNAL
60 70 80 90 100
RERPCMLHRF PSGVAGEKVH QKRVPNGAPP WLETVRVTFP RYNRHADELC
110 120 130 140 150
VTELAHVAWA VQMSTVEFHP WNSRRADTEK PDEWRIDLDP MPDCGFDRVR
160 170 180 190 200
RVAHVAHEIL DELGAVGWPK TSGGRGLHIY VRIEPRWGFT DVRRAALAFA
210 220 230 240 250
HEVERRAPDD VTTTWWRKDR DPRLLFVDYN QNARDHTIAS AYSVRGNPEG
260 270 280 290 300
TVSTPIRWTE IDDAEPGDFT IATVPARFAE VGDLHAGMDD AVFSLDPLLE
310
WADRDGVEEP PEPA
Length:314
Mass (Da):35,643
Last modified:October 19, 2011 - v1
Checksum:i16DA3AE02B549F3A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002896 Genomic DNA. Translation: AEK43176.1.
CP003729 Genomic DNA. Translation: AFO78093.1.
RefSeqiYP_005532633.1. NC_017186.1.
YP_006551038.1. NC_018266.1.

Genome annotation databases

EnsemblBacteriaiAEK43176; AEK43176; RAM_23480.
AFO78093; AFO78093; AMES_4557.
GeneIDi12125269.
13407973.
KEGGiamm:AMES_4557.
amn:RAM_23480.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002896 Genomic DNA. Translation: AEK43176.1 .
CP003729 Genomic DNA. Translation: AFO78093.1 .
RefSeqi YP_005532633.1. NC_017186.1.
YP_006551038.1. NC_018266.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEK43176 ; AEK43176 ; RAM_23480 .
AFO78093 ; AFO78093 ; AMES_4557 .
GeneIDi 12125269.
13407973.
KEGGi amm:AMES_4557.
amn:RAM_23480.

Phylogenomic databases

KOi K01971.

Family and domain databases

InterProi IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view ]
Pfami PF01896. DNA_primase_S. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
    Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
    J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S699Imported.
  2. "Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
    Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
    J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S699Imported.
  3. Biao T.
    Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: S699Imported.

Entry informationi

Entry nameiG0FMN1_AMYMS
AccessioniPrimary (citable) accession number: G0FMN1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: October 1, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3