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G0FKM5

- G0FKM5_AMYMS

UniProt

G0FKM5 - G0FKM5_AMYMS

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Protein
Submitted name: Glutamate decarboxylase
Gene
gadB, AMES_8734, RAM_45505
Organism
Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported
Gene namesi
Name:gadBImported
Ordered Locus Names:AMES_8734Imported, RAM_45505Imported
OrganismiAmycolatopsis mediterranei (strain S699) (Nocardia mediterranei)Imported
Taxonomic identifieri713604 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000006138: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

G0FKM5-1 [UniParc]FASTAAdd to Basket

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MVLHQGKAGR PDRTAGTNPL YAGANPALAA GFVMPHDKLR EDSLPPDTAL    50
QLVRDELMLD GNARLNLATF VTTWMEPQAR ELMAECVDKN MIDKDEYPQT 100
AELERRCVNI LADLWHAPDP GDVMGCSTTG SSEACMLAGM ALKRRWSKLG 150
RTGKPNLVMG ANVQVCWEKF CEYWEVEPRL VPMDGDRYHL TADEAVARCD 200
ENTIGVVAIL GSTFDGSYEP VAEIAAALDS LEERTGWDIP VHVDGASGAM 250
IAPFLDPHLE WDFRLPRVAS INTSGHKYGL VYPGVGWVLW RDKAALPSEL 300
VFNVNYLGGD MPTFALNFSR PGAEVAAQYY TFVRLGREGF RAVQQASRDV 350
ALHLSSGIAS LGPFSLLTRG DQLPVFAFTT RPDVGFDVFD VSRRLRERGW 400
LVPAYTFPEN RTDLAVLRIV VRNGFTHDLA DLLLADLRRV LPELEQFGGR 450
PKDPAKATAF HH 462
Length:462
Mass (Da):51,110
Last modified:October 19, 2011 - v1
Checksum:iD2D44AF965447041
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002896 Genomic DNA. Translation: AEK47566.1.
CP003729 Genomic DNA. Translation: AFO82266.1.
RefSeqiYP_005537023.1. NC_017186.1.
YP_006555211.1. NC_018266.1.

Genome annotation databases

EnsemblBacteriaiAEK47566; AEK47566; RAM_45505.
AFO82266; AFO82266; AMES_8734.
GeneIDi12125810.
13409557.
KEGGiamm:AMES_8734.
amn:RAM_45505.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002896 Genomic DNA. Translation: AEK47566.1 .
CP003729 Genomic DNA. Translation: AFO82266.1 .
RefSeqi YP_005537023.1. NC_017186.1.
YP_006555211.1. NC_018266.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEK47566 ; AEK47566 ; RAM_45505 .
AFO82266 ; AFO82266 ; AMES_8734 .
GeneIDi 12125810.
13409557.
KEGGi amm:AMES_8734.
amn:RAM_45505.

Phylogenomic databases

KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699."
    Verma M., Kaur J., Kumar M., Kumari K., Saxena A., Anand S., Nigam A., Ravi V., Raghuvanshi S., Khurana P., Tyagi A.K., Khurana J.P., Lal R.
    J. Bacteriol. 193:5562-5563(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S699Imported.
  2. "Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy."
    Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
    J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S699Imported.
  3. Biao T.
    Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: S699Imported.

Entry informationi

Entry nameiG0FKM5_AMYMS
AccessioniPrimary (citable) accession number: G0FKM5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 9, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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