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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 subunit

Gene

Sbal117_2652

Organism
Shewanella baltica OS117
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciSBAL693970:GLK3-2703-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
Gene namesi
ORF Names:Sbal117_2652Imported
OrganismiShewanella baltica OS117Imported
Taxonomic identifieri693970 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008879: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0DNF9.
SMRiG0DNF9. Positions 91-939.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

G0DNF9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHQGIMKAWL ESSHLSGANS TYVEEMYEAY QEDPQSVADD WRAVFDNLPP
60 70 80 90 100
VNGASVDAPE AAHSKVRDYF RSLALEGRHK SSARVTDPEM DAKQVKVLQL
110 120 130 140 150
INAHRFRGHQ GANLDPLELW KREPVADLDP AFHGLTKEDM DREFNTGSFA
160 170 180 190 200
HGGETMKLAD LVKALKATYC GSIGAEYMHI TDTDEKRWIQ QRLEPSLGKA
210 220 230 240 250
NYDKSVKTRI LEGLNAAEGI EKYLGAKFPG AKRFSLEGGD ALVPMMREII
260 270 280 290 300
YRAGEAGTKE IVVGMAHRGR LNVLVNVLGK RPAELFDEFA GKHADTHGSG
310 320 330 340 350
DVKYHQGFSS DFETPGGNVH LALAFNPSHL EIVNPVVIGS VRARQDRRGC
360 370 380 390 400
KDGLQVMPIT IHGDSAIAGQ GIVQETFNMS QTRGFTVGGS IRIVVNNQVG
410 420 430 440 450
FTTSNHADTR STEYCTDIAK MVQAPIFHVN SDDPEAVAFV SQLAVDYRNE
460 470 480 490 500
FKRDVVVELV CYRRHGHNEA DEPSATQPLM YAKIKKHPTP RKIYADKLIA
510 520 530 540 550
ENVMAADDVT GLINNYRDAL DQGDCVVKEW RPMTLHSVDW TPYIGREWDE
560 570 580 590 600
AYQASMSAER LQSLADKMSY VPESHPLQSR VAKIYSDRLA MAKGEKPLDW
610 620 630 640 650
GFAETLAYAS ILEDNKRVRI TGQDSGRGTF FHRHAVLHNQ NDGTTYMPLR
660 670 680 690 700
NIADEQGPVD ITDSVLSEAS VLAFEYGYAT AEPGGLTIWE AQFGDFANCA
710 720 730 740 750
QVVIDQFLSS GEQKWGRLCG LTMLLPHGYE GQGPEHSSAR LERFLQMCAN
760 770 780 790 800
HNMQVCVPST PAQVYHMLRR QVVRPMRRPL IVMSPKSLLR HPLAVSSLDD
810 820 830 840 850
LASGSFQNVI GEIDTLEASK VDRVVFCSGK VYFELLEKRR RENITNVALI
860 870 880 890 900
RVEQLYPFPH DEMIVALADY QHVKDFVWCQ EEPQNQGAWY SSQHHFWAAV
910 920 930 940
PAGAQLTYAG REASAAPACG YPELHAHQQE SLVNSALKLT ITL
Length:943
Mass (Da):105,084
Last modified:October 19, 2011 - v1
Checksum:i0326C8C0A8A980C9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002811 Genomic DNA. Translation: AEH14358.1.
RefSeqiYP_006037852.1. NC_017579.1.

Genome annotation databases

EnsemblBacteriaiAEH14358; AEH14358; Sbal117_2652.
GeneIDi12634421.
KEGGisbs:Sbal117_2652.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002811 Genomic DNA. Translation: AEH14358.1.
RefSeqiYP_006037852.1. NC_017579.1.

3D structure databases

ProteinModelPortaliG0DNF9.
SMRiG0DNF9. Positions 91-939.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH14358; AEH14358; Sbal117_2652.
GeneIDi12634421.
KEGGisbs:Sbal117_2652.

Phylogenomic databases

KOiK00164.

Enzyme and pathway databases

BioCyciSBAL693970:GLK3-2703-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome Sequencing of Five Shewanella baltica Strains Recovered from the Oxic-Anoxic Interface of the Baltic Sea."
    Caro-Quintero A., Auchtung J., Deng J., Brettar I., Hofle M., Tiedje J.M., Konstantinidis K.T.
    J. Bacteriol. 194:1236-1236(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS117Imported.

Entry informationi

Entry nameiG0DNF9_9GAMM
AccessioniPrimary (citable) accession number: G0DNF9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 7, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.