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G0DMP3

- G0DMP3_9GAMM

UniProt

G0DMP3 - G0DMP3_9GAMM

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Protein
Submitted name:

Isocitrate dehydrogenase, NADP-dependent

Gene

Sbal117_2611

Organism
Shewanella baltica OS117
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

Cofactori

Note: Binds 1 magnesium or manganese ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei147 – 1471SubstrateUniRule annotation
Sitei257 – 2571Critical for catalysisUniRule annotation
Sitei422 – 4221Critical for catalysisUniRule annotation
Binding sitei549 – 5491SubstrateUniRule annotation

GO - Molecular functioni

  1. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciSBAL693970:GLK3-2662-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenase, NADP-dependentImported (EC:1.1.1.42Imported)
Gene namesi
ORF Names:Sbal117_2611Imported
OrganismiShewanella baltica OS117Imported
Taxonomic identifieri693970 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008879: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0DMP3.
SMRiG0DMP3. Positions 8-739.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni134 – 1418Substrate bindingUniRule annotation

Phylogenomic databases

KOiK00031.

Family and domain databases

Gene3Di3.40.718.10. 3 hits.
InterProiIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamiPF03971. IDH. 1 hit.
[Graphical view]
PIRSFiPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsiTIGR00178. monomer_idh. 1 hit.

Sequencei

Sequence statusi: Complete.

G0DMP3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI
60 70 80 90 100
IASFPEQLTE AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL
110 120 130 140 150
ELQQKGYDIP HYPDEPKTDA EKSIKTRYDK IKGSAVNPVL REGNSDRRAP
160 170 180 190 200
LSVKNFAKKN PHSMGKWATD SKSHVAHMTY GDFYGSEQSV TLSDAGSVNI
210 220 230 240 250
VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER EIENAKAEDV
260 270 280 290 300
LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHAALFAE LGVDVNNGFG
310 320 330 340 350
DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII
360 370 380 390 400
IDASMPAAIR SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA
410 420 430 440 450
FDPKTMGSVP NVGLMAQKAE EYGSHDKTFE MPADGVVNVV DASGKVLMSH
460 470 480 490 500
NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR LSNTPAVFWL DSKRAHDAQI
510 520 530 540 550
IAKVQQYLPE HDTDGLDISI MSPEDATRLS LARIKEGKDT ISVTGNVLRD
560 570 580 590 600
YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
610 620 630 640 650
LRWDSLGEFL ALAASLEHLS QTVGNPKAQV LADTLDQAIG QFLDSNKSPS
660 670 680 690 700
RRVGELDNRG SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI
710 720 730 740
VAELATAQGA PVDLGGYYRL DAAKAEKAMR PSETLNKLLI A
Length:741
Mass (Da):80,354
Last modified:October 19, 2011 - v1
Checksum:iBA28276443C5D718
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002811 Genomic DNA. Translation: AEH14317.1.
RefSeqiWP_011847002.1. NC_017579.1.
YP_006037811.1. NC_017579.1.

Genome annotation databases

EnsemblBacteriaiAEH14317; AEH14317; Sbal117_2611.
GeneIDi12634380.
KEGGisbs:Sbal117_2611.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002811 Genomic DNA. Translation: AEH14317.1 .
RefSeqi WP_011847002.1. NC_017579.1.
YP_006037811.1. NC_017579.1.

3D structure databases

ProteinModelPortali G0DMP3.
SMRi G0DMP3. Positions 8-739.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEH14317 ; AEH14317 ; Sbal117_2611 .
GeneIDi 12634380.
KEGGi sbs:Sbal117_2611.

Phylogenomic databases

KOi K00031.

Enzyme and pathway databases

BioCyci SBAL693970:GLK3-2662-MONOMER.

Family and domain databases

Gene3Di 3.40.718.10. 3 hits.
InterProi IPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
Pfami PF03971. IDH. 1 hit.
[Graphical view ]
PIRSFi PIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsi TIGR00178. monomer_idh. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome Sequencing of Five Shewanella baltica Strains Recovered from the Oxic-Anoxic Interface of the Baltic Sea."
    Caro-Quintero A., Auchtung J., Deng J., Brettar I., Hofle M., Tiedje J.M., Konstantinidis K.T.
    J. Bacteriol. 194:1236-1236(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS117Imported.

Entry informationi

Entry nameiG0DMP3_9GAMM
AccessioniPrimary (citable) accession number: G0DMP3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: November 26, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3