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Protein
Submitted name:

Isocitrate dehydrogenase, NADP-dependent

Gene

Sbal117_2611

Organism
Shewanella baltica OS117
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Cofactori

Mg2+UniRule annotation, Mn2+UniRule annotationNote: Binds 1 Mg(2+) or Mn2+ ion per subunit.UniRule annotation

GO - Molecular functioni

  1. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciSBAL693970:GLK3-2662-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenase, NADP-dependentImported (EC:1.1.1.42Imported)
Gene namesi
ORF Names:Sbal117_2611Imported
OrganismiShewanella baltica OS117Imported
Taxonomic identifieri693970 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008879: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0DMP3.
SMRiG0DMP3. Positions 8-739.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK00031.

Family and domain databases

Gene3Di3.40.718.10. 3 hits.
InterProiIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamiPF03971. IDH. 1 hit.
[Graphical view]
PIRSFiPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsiTIGR00178. monomer_idh. 1 hit.

Sequencei

Sequence statusi: Complete.

G0DMP3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI
60 70 80 90 100
IASFPEQLTE AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL
110 120 130 140 150
ELQQKGYDIP HYPDEPKTDA EKSIKTRYDK IKGSAVNPVL REGNSDRRAP
160 170 180 190 200
LSVKNFAKKN PHSMGKWATD SKSHVAHMTY GDFYGSEQSV TLSDAGSVNI
210 220 230 240 250
VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER EIENAKAEDV
260 270 280 290 300
LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHAALFAE LGVDVNNGFG
310 320 330 340 350
DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII
360 370 380 390 400
IDASMPAAIR SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA
410 420 430 440 450
FDPKTMGSVP NVGLMAQKAE EYGSHDKTFE MPADGVVNVV DASGKVLMSH
460 470 480 490 500
NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR LSNTPAVFWL DSKRAHDAQI
510 520 530 540 550
IAKVQQYLPE HDTDGLDISI MSPEDATRLS LARIKEGKDT ISVTGNVLRD
560 570 580 590 600
YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
610 620 630 640 650
LRWDSLGEFL ALAASLEHLS QTVGNPKAQV LADTLDQAIG QFLDSNKSPS
660 670 680 690 700
RRVGELDNRG SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI
710 720 730 740
VAELATAQGA PVDLGGYYRL DAAKAEKAMR PSETLNKLLI A
Length:741
Mass (Da):80,354
Last modified:October 19, 2011 - v1
Checksum:iBA28276443C5D718
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002811 Genomic DNA. Translation: AEH14317.1.
RefSeqiWP_011847002.1. NC_017579.1.
YP_006037811.1. NC_017579.1.

Genome annotation databases

EnsemblBacteriaiAEH14317; AEH14317; Sbal117_2611.
GeneIDi12634380.
KEGGisbs:Sbal117_2611.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002811 Genomic DNA. Translation: AEH14317.1.
RefSeqiWP_011847002.1. NC_017579.1.
YP_006037811.1. NC_017579.1.

3D structure databases

ProteinModelPortaliG0DMP3.
SMRiG0DMP3. Positions 8-739.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH14317; AEH14317; Sbal117_2611.
GeneIDi12634380.
KEGGisbs:Sbal117_2611.

Phylogenomic databases

KOiK00031.

Enzyme and pathway databases

BioCyciSBAL693970:GLK3-2662-MONOMER.

Family and domain databases

Gene3Di3.40.718.10. 3 hits.
InterProiIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamiPF03971. IDH. 1 hit.
[Graphical view]
PIRSFiPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsiTIGR00178. monomer_idh. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome Sequencing of Five Shewanella baltica Strains Recovered from the Oxic-Anoxic Interface of the Baltic Sea."
    Caro-Quintero A., Auchtung J., Deng J., Brettar I., Hofle M., Tiedje J.M., Konstantinidis K.T.
    J. Bacteriol. 194:1236-1236(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS117Imported.

Entry informationi

Entry nameiG0DMP3_9GAMM
AccessioniPrimary (citable) accession number: G0DMP3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: February 4, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.