G0CB32 (G0CB32_XANCA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr EMBL AEL05586.1
ORF Names:	XCR_0667 EMBL AEL05586.1

Organism

Xanthomonas campestris pv. raphani 756C EMBL AEL05586.1

Taxonomic identifier

990315 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas › Xanthomonas campestris › Xanthomonas campestris pv. raphani

Protein attributes

Sequence length	360 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G0CB32 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: 78B98FDFEE866C67	FASTA	360	39,253
	10 20 30 40 50 60 MRPAQALIDL DALRHNYRLA RQLGGGKALA VVKADAYGHG AVRCAQALEP EADGFAVACI 70 80 90 100 110 120 EEALELRQAG VRAPILLLEG FFEHDELALI AEHDLWTVVA TPWQVRALAE FRSPRPLRVW 130 140 150 160 170 180 LKLDSGMHRL GLSPEDFRAA WLHLRGLQQI DSLVLMTHLA QADELECSRT DEQAVAFALT 190 200 210 220 230 240 CGGMRAETSL RNSPGLLGWP ALRNDWSRPG LMLYGANPFP QPTELTAQLR PVMTVRSRII 250 260 270 280 290 300 SVRDLPAGEP VGYGARFVAE RPTRVGVVAM GYADGYPQFA PNGTPVLVDG KVCPLIGRVS 310 320 330 340 350 360 MDMLTVDLTE HPQADVGTPV QLWGDAPQVS TLAAQCNVSA YQLLCGLKRV PRHYSAPAHA

References

[1]

"Two New Complete Genome Sequences Offer Insight into Host and Tissue Specificity of Plant Pathogenic Xanthomonas spp." Bogdanove A.J., Koebnik R., Lu H., Furutani A., Angiuoli S.V., Patil P.B., Van Sluys M.A., Ryan R.P., Meyer D.F., Han S.W., Aparna G., Rajaram M., Delcher A.L., Phillippy A.M., Puiu D., Schatz M.C., Shumway M., Sommer D.D. , Trapnell C., Benahmed F., Dimitrov G., Madupu R., Radune D., Sullivan S., Jha G., Ishihara H., Lee S.W., Pandey A., Sharma V., Sriariyanun M., Szurek B., Vera-Cruz C.M., Dorman K.S., Ronald P.C., Verdier V., Dow J.M., Sonti R.V., Tsuge S., Brendel V.P., Rabinowicz P.D., Leach J.E., White F.F., Salzberg S.L. J. Bacteriol. 193:5450-5464(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 756C EMBL AEL05586.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002789 Genomic DNA. Translation: AEL05586.1.
RefSeq	YP_005635704.1. NC_017271.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEL05586; AEL05586; XCR_0667.
GeneID	12262726.
KEGG	xcp:XCR_0667.
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G0CB32_XANCA

Accession

Primary (citable) accession number: G0CB32

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)