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G0BY01 (G0BY01_9ENTR) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP-Rule MF_01201

EC=5.1.1.1 HAMAP-Rule MF_01201
Gene names
ORF Names:SerAS13_2781 EMBL AEG28557.1
OrganismSerratia sp. AS13 [Complete proteome] EMBL AEG28557.1
Taxonomic identifier768493 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia

Protein attributes

Sequence length357 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2531Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1301Substrate By similarity HAMAP-Rule MF_01201
Binding site3011Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
G0BY01 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: D44146A4FDA6C89C

FASTA35738,539
        10         20         30         40         50         60 
MPRPITATLH LSAFENNLQV VRRFAPSAKI WSVVKANAYG HGIKHVWRSL EQTDGFALLD 

        70         80         90        100        110        120 
LTEAILLRES GWQGPILLLE GFFKPQDLVL LDRYRLTTSV HSDWQLAAIA AAKLSAPLDV 

       130        140        150        160        170        180 
YLKVNSGMNR LGFSPDRLHS VWLQAREMGN IASLTLMSHF ATADGPQGVA EQMTIIEGAT 

       190        200        210        220        230        240 
AGIPLPRSLA NSAATLWHPQ THGNWVRPGI VLYGASPSGQ WRDIADTGLR PTMTLSSEII 

       250        260        270        280        290        300 
GIQSLKGGDR VGYGWRYSAS AAQRIGVVAC GYADGYPRHA QTGTPVWVDG VLTRTVGTVS 

       310        320        330        340        350 
MDMLAVDLTP CPRADIGSEV ELWGRRLPVD DVAAAAGTLG YELLTALAAR VPVTVEA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002775 Genomic DNA. Translation: AEG28557.1.
RefSeqYP_006025621.1. NC_017573.1.

3D structure databases

ProteinModelPortalG0BY01.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG28557; AEG28557; SerAS13_2781.
GeneID12621760.
KEGGsra:SerAS13_2781.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycSSP768493:GLK0-2848-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0BY01_9ENTR
AccessionPrimary (citable) accession number: G0BY01
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 9, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)