G0BY01 (G0BY01_9ENTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AEG28557.1
EC=5.1.1.1 EMBL AEG28557.1

Gene names

ORF Names:

SerAS13_2781 EMBL AEG28557.1

Organism

Serratia sp. AS13 EMBL AEG28557.1

Taxonomic identifier

768493 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Serratia

Protein attributes

Sequence length	357 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL AEG28557.1
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G0BY01 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: D44146A4FDA6C89C	FASTA	357	38,539
	10 20 30 40 50 60 MPRPITATLH LSAFENNLQV VRRFAPSAKI WSVVKANAYG HGIKHVWRSL EQTDGFALLD 70 80 90 100 110 120 LTEAILLRES GWQGPILLLE GFFKPQDLVL LDRYRLTTSV HSDWQLAAIA AAKLSAPLDV 130 140 150 160 170 180 YLKVNSGMNR LGFSPDRLHS VWLQAREMGN IASLTLMSHF ATADGPQGVA EQMTIIEGAT 190 200 210 220 230 240 AGIPLPRSLA NSAATLWHPQ THGNWVRPGI VLYGASPSGQ WRDIADTGLR PTMTLSSEII 250 260 270 280 290 300 GIQSLKGGDR VGYGWRYSAS AAQRIGVVAC GYADGYPRHA QTGTPVWVDG VLTRTVGTVS 310 320 330 340 350 MDMLAVDLTP CPRADIGSEV ELWGRRLPVD DVAAAAGTLG YELLTALAAR VPVTVEA

References

[1]

"Complete sequence of Serratia sp. AS13." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Held B., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Neupane S., Alstrom S. , Finlay R., Hogberg N., Woyke T. Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: AS13 EMBL AEG28557.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002775 Genomic DNA. Translation: AEG28557.1.
RefSeq	YP_006025621.1. NC_017573.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEG28557; AEG28557; SerAS13_2781.
GeneID	12621760.
KEGG	sra:SerAS13_2781.
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G0BY01_9ENTR

Accession

Primary (citable) accession number: G0BY01

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)