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G0BEI6 (G0BEI6_SERSA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.98 EMBL AEF44499.1
Gene names
Ordered Locus Names:SerAS9_1363 EMBL AEF44499.1
OrganismSerratia plymuthica (strain AS9) [Complete proteome] [HAMAP] EMBL AEF44499.1
Taxonomic identifier768492 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia

Protein attributes

Sequence length496 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G0BEI6 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 8AB33327B6E14FC2

FASTA49655,659
        10         20         30         40         50         60 
MTKKTTLLQF FHWYYPDGGK LWQEAAERAP HIAGLGITDL WLPPAYKGAS GGYSVGYDSY 

        70         80         90        100        110        120 
DLFDLGEFDQ KGSRATKYGD KEALTHAAAT LRNNGVRVIY DVVFNHKLGA DEKEQVHVYR 

       130        140        150        160        170        180 
ADVNNRNNIH DQGFDALAYT RFTFPGRQGA YSQFIWDYKC FGGVDYIEQP DEKGVFKIDN 

       190        200        210        220        230        240 
DYGDDGWNDQ VGGEKGNYDY LMGADVEFRN SAVAEELKFW ARWLMETLPC DGFRLDAAKH 

       250        260        270        280        290        300 
IPAWFFKEWA DHVRDAAQRD LFIVAEYWSH DLAALRQYID LVDGKVMLFD VALHLKFHQA 

       310        320        330        340        350        360 
SKQGDGFDMA QIFTDTLTAA DPAHSVTLVA NHDTQPLQSL EAPVEPWFKP LAYALILLRE 

       370        380        390        400        410        420 
QGVPCVFYPD LYGASYKDKG GDGNEYQIDM PVIPELEKLI QARQHFANGV QTDYFNDRNC 

       430        440        450        460        470        480 
VAFSRSGTAD TPGCVVVLTN GAENGKAVSL GAELAHKTWR DLLGNRQDEV TTDDQGNATF 

       490 
PVNGGSVSVW VLAENL 

« Hide

References

[1]"Complete sequence of Serratia sp. AS9."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Neupane S., Alstrom S. expand/collapse author list , Finlay R., Hogberg N., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9."
Neupane S., Hogberg N., Alstrom S., Lucas S., Han J., Lapidus A., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Han C., Detter J.C., Tapia R., Fiebig A., Land M. expand/collapse author list , Hauser L., Kyrpides N.C., Ivanova N., Pagani I., Klenk H.P., Woyke T., Finlay R.D.
Stand. Genomic Sci. 6:54-62(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AS9 EMBL AEF44499.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002773 Genomic DNA. Translation: AEF44499.1.
RefSeqYP_004504760.1. NC_015567.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF44499; AEF44499; SerAS9_1363.
GeneID10620478.
KEGGsrr:SerAS9_1363.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMARATKYGD.

Enzyme and pathway databases

BioCycSPLY768492:GLK1-1416-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0BEI6_SERSA
AccessionPrimary (citable) accession number: G0BEI6
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 9, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)