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G0BAB5 (G0BAB5_SERSA) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
NADH-quinone oxidoreductase subunit N HAMAP-Rule MF_00445
EC=1.6.99.5 HAMAP-Rule MF_00445
Alternative name(s):
NADH dehydrogenase I subunit N HAMAP-Rule MF_00445
NDH-1 subunit N HAMAP-Rule MF_00445
Gene names
Name:nuoN HAMAP-Rule MF_00445
Ordered Locus Names:SerAS9_3493 EMBL AEF46602.1
OrganismSerratia plymuthica (strain AS9) [Complete proteome] [HAMAP] EMBL AEF46602.1
Taxonomic identifier768492 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Serratia ›

Protein attributes

Sequence length485 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient By similarity. HAMAP-Rule MF_00445

Catalytic activity

NADH + quinone = NAD+ + quinol. HAMAP-Rule MF_00445

Subunit structure

NDH-1 is composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex By similarity. HAMAP-Rule MF_00445

NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex By similarity. HAMAP-Rule MF_00445

Subcellular location

Cell inner membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_00445.

Membrane; Multi-pass membrane protein By similarity RuleBase RU000320.

Sequence similarities

Belongs to the complex I subunit 2 family. HAMAP-Rule MF_00445

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Transmembrane8 – 2821Helical; By similarity HAMAP-Rule MF_00445
Transmembrane35 – 5521Helical; By similarity HAMAP-Rule MF_00445
Transmembrane78 – 9821Helical; By similarity HAMAP-Rule MF_00445
Transmembrane104 – 12421Helical; By similarity HAMAP-Rule MF_00445
Transmembrane125 – 14521Helical; By similarity HAMAP-Rule MF_00445
Transmembrane159 – 17921Helical; By similarity HAMAP-Rule MF_00445
Transmembrane203 – 22321Helical; By similarity HAMAP-Rule MF_00445
Transmembrane235 – 25521Helical; By similarity HAMAP-Rule MF_00445
Transmembrane271 – 29121Helical; By similarity HAMAP-Rule MF_00445
Transmembrane297 – 31721Helical; By similarity HAMAP-Rule MF_00445
Transmembrane327 – 34721Helical; By similarity HAMAP-Rule MF_00445
Transmembrane374 – 39421Helical; By similarity HAMAP-Rule MF_00445
Transmembrane408 – 42720Helical; By similarity HAMAP-Rule MF_00445
Transmembrane449 – 46921Helical; By similarity HAMAP-Rule MF_00445

Sequences

Sequence LengthMass (Da)Tools
G0BAB5 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 93A66B96324B1EF4

FASTA48552,224
        10         20         30         40         50         60 
MTITPQQLIA LLPLLIVGLT VVVVMLGIAW RRDHFINATL TVIGLNLALL SLYFVGQAGP 

        70         80         90        100        110        120 
MDVTPLLRVD GYSMFYTGLV ILASLATCTF AYPWLVGYPD NREEFYLLVL IATLGGIVLA 

       130        140        150        160        170        180 
SANHLASLFI GIELISLPLF GLVGYAYRQK RPLEAAIKYM LLSAAASSFL LFGMALLYAE 

       190        200        210        220        230        240 
SGDLSLAGLG KSLHENMMHQ PLILAGMGMM IVGLGFKLSL VPFQLWTPDV YQGAPAPVST 

       250        260        270        280        290        300 
FLATASKIAI FAVVMRLFLY APAADSEALR MVLSIIAVCS ILFGNLMAIS QTNIKRLLGY 

       310        320        330        340        350        360 
SSIAHLGYLL VALIAVQTHQ LSLETAGVYL AGYLFSSLGA FGVVSLMSSP YRGPDADSLF 

       370        380        390        400        410        420 
SYRGLFWHKP ILSAVMTVMM LSLAGIPMTL GFIGKFFVIA MGVSAHLWWL TGAVVLGSAI 

       430        440        450        460        470        480 
GLYYYLRVTV SLFLSAPEAL QRDTPNNWAL TAGGVVVLIS AALVLLLGVY PQPLITLVQM 


AQPMF

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References

[1]"Complete sequence of Serratia sp. AS9."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Neupane S., Alstrom S. expand/collapse author list , Finlay R., Hogberg N., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9."
Neupane S., Hogberg N., Alstrom S., Lucas S., Han J., Lapidus A., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Han C., Detter J.C., Tapia R., Fiebig A., Land M. expand/collapse author list , Hauser L., Kyrpides N.C., Ivanova N., Pagani I., Klenk H.P., Woyke T., Finlay R.D.
Stand. Genomic Sci. 6:54-62(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AS9.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002773 Genomic DNA. Translation: AEF46602.1.
RefSeqYP_004506863.1. NC_015567.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF46602; AEF46602; SerAS9_3493.
GeneID10622630.
KEGGsrr:SerAS9_3493.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00343.
OMAQLGLGMM.

Family and domain databases

HAMAPMF_00445. NDH1_NuoN_1.
InterProIPR010096. NADH-Q_OxRdtase_suN/2.
IPR001750. NADH_UbQ/plastoQ_OxRdtase.
[Graphical view]
PfamPF00361. Oxidored_q1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01770. NDH_I_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0BAB5_SERSA
AccessionPrimary (citable) accession number: G0BAB5
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info