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G0AQ70 (G0AQ70_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.5.1.1 EMBL AEG11752.1
Gene names
ORF Names:Sbal175_2501 EMBL AEG11752.1
OrganismShewanella baltica BA175 [Complete proteome] EMBL AEG11752.1
Taxonomic identifier693974 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length309 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AEG11752.1
   Molecular functionLigase EMBL AEG11752.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4343 Potential EMBL AEG11752.1
Chain44 – 309266 Potential EMBL AEG11752.1
PRO_5000774798

Sequences

Sequence LengthMass (Da)Tools
G0AQ70 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: C3F31AD629ED35F0

FASTA30934,903
        10         20         30         40         50         60 
MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LIFGCLAPVT YAQNSPPSIQ LATEFDAQQE 

        70         80         90        100        110        120 
IHIQDFLISE KLDGVRGYWN GQALLTRQGN LIAVPTWFIA NFPNYPLDGE LWLGRGQFEA 

       130        140        150        160        170        180 
MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG DFQHRYQFAL AELSDKSHYL EVIAQFQVDS 

       190        200        210        220        230        240 
LEALYQKLDS LVAKGAEGLM LHRSSATYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA 

       250        260        270        280        290        300 
GQMGAIRVQT PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRV 


DIDKIDSQQ 

« Hide

References

[1]"Complete sequence of chromosome of Shewanella baltica BA175."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Konstantinidis K., Deng J. expand/collapse author list , Brettar I., Hofle M., Tiedje J., Auchtung J., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BA175 EMBL AEG11752.1.
[2]"Genome Sequencing of Five Shewanella baltica Strains Recovered from the Oxic-Anoxic Interface of the Baltic Sea."
Caro-Quintero A., Auchtung J., Deng J., Brettar I., Hofle M., Tiedje J.M., Konstantinidis K.T.
J. Bacteriol. 194:1236-1236(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BA175 EMBL AEG11752.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002767 Genomic DNA. Translation: AEG11752.1.
RefSeqYP_006021058.1. NC_017571.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG11752; AEG11752; Sbal175_2501.
GeneID12617004.
KEGGsbb:Sbal175_2501.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycSBAL693974:GLK2-2603-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0AQ70_9GAMM
AccessionPrimary (citable) accession number: G0AQ70
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: June 11, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)