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Protein
Submitted name:

DNA ligase (ATP)

Gene

Sbal175_2501

Organism
Shewanella baltica BA175
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSBAL693974:GLK2-2603-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:Sbal175_2501Imported
OrganismiShewanella baltica BA175Imported
Taxonomic identifieri693974 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002249 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4343 PotentialImportedAdd
BLAST
Chaini44 – 309266 PotentialImportedPRO_5000774798Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

G0AQ70-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LIFGCLAPVT YAQNSPPSIQ
60 70 80 90 100
LATEFDAQQE IHIQDFLISE KLDGVRGYWN GQALLTRQGN LIAVPTWFIA
110 120 130 140 150
NFPNYPLDGE LWLGRGQFEA MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG
160 170 180 190 200
DFQHRYQFAL AELSDKSHYL EVIAQFQVDS LEALYQKLDS LVAKGAEGLM
210 220 230 240 250
LHRSSATYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA GQMGAIRVQT
260 270 280 290 300
PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRV

DIDKIDSQQ
Length:309
Mass (Da):34,903
Last modified:October 19, 2011 - v1
Checksum:iC3F31AD629ED35F0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002767 Genomic DNA. Translation: AEG11752.1.
RefSeqiWP_006081348.1. NC_017571.1.

Genome annotation databases

EnsemblBacteriaiAEG11752; AEG11752; Sbal175_2501.
KEGGisbb:Sbal175_2501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002767 Genomic DNA. Translation: AEG11752.1.
RefSeqiWP_006081348.1. NC_017571.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEG11752; AEG11752; Sbal175_2501.
KEGGisbb:Sbal175_2501.

Phylogenomic databases

KOiK10747.

Enzyme and pathway databases

BioCyciSBAL693974:GLK2-2603-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome Sequencing of Five Shewanella baltica Strains Recovered from the Oxic-Anoxic Interface of the Baltic Sea."
    Caro-Quintero A., Auchtung J., Deng J., Brettar I., Hofle M., Tiedje J.M., Konstantinidis K.T.
    J. Bacteriol. 194:1236-1236(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BA175Imported.

Entry informationi

Entry nameiG0AQ70_9GAMM
AccessioniPrimary (citable) accession number: G0AQ70
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 22, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.