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G0AQ70

- G0AQ70_9GAMM

UniProt

G0AQ70 - G0AQ70_9GAMM

Protein
Submitted name:

DNA ligase (ATP)

Gene

Sbal175_2501

Organism
Shewanella baltica BA175
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSBAL693974:GLK2-2603-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:Sbal175_2501Imported
    OrganismiShewanella baltica BA175Imported
    Taxonomic identifieri693974 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002249: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 4343 PotentialImportedAdd
    BLAST
    Chaini44 – 309266 PotentialImportedPRO_5000774798Add
    BLAST

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    G0AQ70-1 [UniParc]FASTAAdd to Basket

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    MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LIFGCLAPVT YAQNSPPSIQ    50
    LATEFDAQQE IHIQDFLISE KLDGVRGYWN GQALLTRQGN LIAVPTWFIA 100
    NFPNYPLDGE LWLGRGQFEA MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG 150
    DFQHRYQFAL AELSDKSHYL EVIAQFQVDS LEALYQKLDS LVAKGAEGLM 200
    LHRSSATYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA GQMGAIRVQT 250
    PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRV 300
    DIDKIDSQQ 309
    Length:309
    Mass (Da):34,903
    Last modified:October 19, 2011 - v1
    Checksum:iC3F31AD629ED35F0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002767 Genomic DNA. Translation: AEG11752.1.
    RefSeqiWP_006081348.1. NC_017571.1.
    YP_006021058.1. NC_017571.1.

    Genome annotation databases

    EnsemblBacteriaiAEG11752; AEG11752; Sbal175_2501.
    GeneIDi12617004.
    KEGGisbb:Sbal175_2501.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002767 Genomic DNA. Translation: AEG11752.1 .
    RefSeqi WP_006081348.1. NC_017571.1.
    YP_006021058.1. NC_017571.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEG11752 ; AEG11752 ; Sbal175_2501 .
    GeneIDi 12617004.
    KEGGi sbb:Sbal175_2501.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SBAL693974:GLK2-2603-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome Sequencing of Five Shewanella baltica Strains Recovered from the Oxic-Anoxic Interface of the Baltic Sea."
      Caro-Quintero A., Auchtung J., Deng J., Brettar I., Hofle M., Tiedje J.M., Konstantinidis K.T.
      J. Bacteriol. 194:1236-1236(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BA175Imported.

    Entry informationi

    Entry nameiG0AQ70_9GAMM
    AccessioniPrimary (citable) accession number: G0AQ70
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3