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Protein
Submitted name:

ATP dependent DNA ligase

Gene

CFU_3225

Organism
Collimonas fungivorans (strain Ter331)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCFUN1005048:GJNH-3247-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:CFU_3225Imported
OrganismiCollimonas fungivorans (strain Ter331)Imported
Taxonomic identifieri1005048 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeCollimonas
ProteomesiUP000008392: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0ACU4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiVRGYWDG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

G0ACU4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MHALSPNVSP ILARFLSTLL LCLFFGRPSI AAPATPPAAP PLMLANIYHP
60 70 80 90 100
GITLADYWVS EKLDGVRGYW DGEKLLTRGG QRINAPPWFT AGWPKTPLDG
110 120 130 140 150
ELWAGRQQFS HAVSTVRREM PDDAAWRRMR FMVFDLPAHP GSFDQRLAAL
160 170 180 190 200
QSTLAKLAVP WLQPVAQSKL NDHAALRRLL QQTVRQGGEG LMLHRGASLY
210 220 230 240 250
RAQRSDDLLK VKTHEDAEAR VIAHLPGKGK YQGMLGALLV ETPDGLRFKL
260 270 280 290
GSGFSDEQRR RPPALGSVVT YRFRGLNDSG IPRFASFMRV YEQQ
Length:294
Mass (Da):32,772
Last modified:October 19, 2011 - v1
Checksum:i99112C7F1FD13000
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002745 Genomic DNA. Translation: AEK63049.1.
RefSeqiYP_004753872.1. NC_015856.1.

Genome annotation databases

EnsemblBacteriaiAEK63049; AEK63049; CFU_3225.
GeneIDi10993932.
KEGGicfu:CFU_3225.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002745 Genomic DNA. Translation: AEK63049.1.
RefSeqiYP_004753872.1. NC_015856.1.

3D structure databases

ProteinModelPortaliG0ACU4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEK63049; AEK63049; CFU_3225.
GeneIDi10993932.
KEGGicfu:CFU_3225.

Phylogenomic databases

KOiK01971.
OMAiVRGYWDG.

Enzyme and pathway databases

BioCyciCFUN1005048:GJNH-3247-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Collimonas fungivorans Ter331."
    Leveau J.H.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ter331Imported.

Entry informationi

Entry nameiG0ACU4_COLFT
AccessioniPrimary (citable) accession number: G0ACU4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 7, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.