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G0A8U2

- G0A8U2_COLFT

UniProt

G0A8U2 - G0A8U2_COLFT

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
CFU_1974
Organism
Collimonas fungivorans (strain Ter331)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCFUN1005048:GJNH-1987-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:CFU_1974Imported
OrganismiCollimonas fungivorans (strain Ter331)Imported
Taxonomic identifieri1005048 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeCollimonas
ProteomesiUP000008392: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0A8U2.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiSACDMAL.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0A8U2-1 [UniParc]FASTAAdd to Basket

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MSDPLTSYRK KRDFTVTPEP STAGQASRGG RAFVIQKHWA SRLHYDFRIE    50
LGGAMKSWAI PKGPSLDPKD KRMAVHVEDH PISYNSFEGD IPAGQYGAGK 100
VIIWDKGSWE AVDGDPLKQY RSGHLKFELR GHKLHGRWAL IRMKPDSQKK 150
EAWLLIKEKD DYARPALTYS VVDEMPDSVA GLAVKEERKP APVAASPRKH 200
AKMPAGAVKA ALPTHLAPQL ATLADAAPGG AGWLYEIKFD GYRLLARVSG 250
KSLRLYTRNG NDWTAKLPAL TAALQRMKLP AGWYDGEIVV LDERGLPDFQ 300
RLQQAFDSAG SAAAVSYYLF DLPFYDGYDM RGVPLRERRK LLQSLFNTKT 350
PAPVRLSDAF DVSAKDIVAS ACRMGLEGVI GKRQDSLYVT RRSTDWIKLK 400
CTQRQEFVIG GYTDPQGSRI GIGSLLLGVH DAHGKLRYAG NVGTGFDARG 450
LAALANKLKA ISAASSPFSG ATGRYRKVHW VEPLLLAEVS FAEWTADGHI 500
RHSVFHGLRS DKQPQAINRE NAMHIPAAEP QSKTLESLKV THGERVIDAA 550
SGITKIELIR YYGLVAPLML PHLKGRPVSL LRAPDGLAGQ LFFQKHLGEI 600
KMHGVRQLAT ALDPGHPPLL EIAGAGGLLS AAQMNVLEFH TWNALKTSIM 650
KPDRMTFDLD PGEKTTWESV QQAALLLRAF LQQLELEAVI KTSGGKGLHV 700
VVPIKKQHGW DTVKDFSHAI VDHLAGALPD RFVARSGARN RVGKIFVDYL 750
RNGFGATTAA AWSVRARPGL GVSVPIGWDE LEKIKGGAHW TVADIHARLD 800
QGNAPWEANG SRPQSLARPM KILEFKPARK 830
Length:830
Mass (Da):91,259
Last modified:October 19, 2011 - v1
Checksum:i0C989565AF6F69B1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002745 Genomic DNA. Translation: AEK61805.1.
RefSeqiYP_004752628.1. NC_015856.1.

Genome annotation databases

EnsemblBacteriaiAEK61805; AEK61805; CFU_1974.
GeneIDi10992688.
KEGGicfu:CFU_1974.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002745 Genomic DNA. Translation: AEK61805.1 .
RefSeqi YP_004752628.1. NC_015856.1.

3D structure databases

ProteinModelPortali G0A8U2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEK61805 ; AEK61805 ; CFU_1974 .
GeneIDi 10992688.
KEGGi cfu:CFU_1974.

Phylogenomic databases

KOi K01971.
OMAi SACDMAL.

Enzyme and pathway databases

BioCyci CFUN1005048:GJNH-1987-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Collimonas fungivorans Ter331."
    Leveau J.H.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ter331.

Entry informationi

Entry nameiG0A8U2_COLFT
AccessioniPrimary (citable) accession number: G0A8U2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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