Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

G0A8U2

- G0A8U2_COLFT

UniProt

G0A8U2 - G0A8U2_COLFT

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

CFU_1974

Organism
Collimonas fungivorans (strain Ter331)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCFUN1005048:GJNH-1987-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:CFU_1974Imported
    OrganismiCollimonas fungivorans (strain Ter331)Imported
    Taxonomic identifieri1005048 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeCollimonas
    ProteomesiUP000008392: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG0A8U2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiSACDMAL.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G0A8U2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDPLTSYRK KRDFTVTPEP STAGQASRGG RAFVIQKHWA SRLHYDFRIE    50
    LGGAMKSWAI PKGPSLDPKD KRMAVHVEDH PISYNSFEGD IPAGQYGAGK 100
    VIIWDKGSWE AVDGDPLKQY RSGHLKFELR GHKLHGRWAL IRMKPDSQKK 150
    EAWLLIKEKD DYARPALTYS VVDEMPDSVA GLAVKEERKP APVAASPRKH 200
    AKMPAGAVKA ALPTHLAPQL ATLADAAPGG AGWLYEIKFD GYRLLARVSG 250
    KSLRLYTRNG NDWTAKLPAL TAALQRMKLP AGWYDGEIVV LDERGLPDFQ 300
    RLQQAFDSAG SAAAVSYYLF DLPFYDGYDM RGVPLRERRK LLQSLFNTKT 350
    PAPVRLSDAF DVSAKDIVAS ACRMGLEGVI GKRQDSLYVT RRSTDWIKLK 400
    CTQRQEFVIG GYTDPQGSRI GIGSLLLGVH DAHGKLRYAG NVGTGFDARG 450
    LAALANKLKA ISAASSPFSG ATGRYRKVHW VEPLLLAEVS FAEWTADGHI 500
    RHSVFHGLRS DKQPQAINRE NAMHIPAAEP QSKTLESLKV THGERVIDAA 550
    SGITKIELIR YYGLVAPLML PHLKGRPVSL LRAPDGLAGQ LFFQKHLGEI 600
    KMHGVRQLAT ALDPGHPPLL EIAGAGGLLS AAQMNVLEFH TWNALKTSIM 650
    KPDRMTFDLD PGEKTTWESV QQAALLLRAF LQQLELEAVI KTSGGKGLHV 700
    VVPIKKQHGW DTVKDFSHAI VDHLAGALPD RFVARSGARN RVGKIFVDYL 750
    RNGFGATTAA AWSVRARPGL GVSVPIGWDE LEKIKGGAHW TVADIHARLD 800
    QGNAPWEANG SRPQSLARPM KILEFKPARK 830
    Length:830
    Mass (Da):91,259
    Last modified:October 19, 2011 - v1
    Checksum:i0C989565AF6F69B1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002745 Genomic DNA. Translation: AEK61805.1.
    RefSeqiYP_004752628.1. NC_015856.1.

    Genome annotation databases

    EnsemblBacteriaiAEK61805; AEK61805; CFU_1974.
    GeneIDi10992688.
    KEGGicfu:CFU_1974.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002745 Genomic DNA. Translation: AEK61805.1 .
    RefSeqi YP_004752628.1. NC_015856.1.

    3D structure databases

    ProteinModelPortali G0A8U2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEK61805 ; AEK61805 ; CFU_1974 .
    GeneIDi 10992688.
    KEGGi cfu:CFU_1974.

    Phylogenomic databases

    KOi K01971.
    OMAi SACDMAL.

    Enzyme and pathway databases

    BioCyci CFUN1005048:GJNH-1987-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Collimonas fungivorans Ter331."
      Leveau J.H.
      Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ter331Imported.

    Entry informationi

    Entry nameiG0A8U2_COLFT
    AccessioniPrimary (citable) accession number: G0A8U2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3