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G0A8U2 (G0A8U2_COLFT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL AEK61805.1
Gene names
Ordered Locus Names:CFU_1974 EMBL AEK61805.1
OrganismCollimonas fungivorans (strain Ter331) [Complete proteome] [HAMAP] EMBL AEK61805.1
Taxonomic identifier1005048 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeCollimonas

Protein attributes

Sequence length830 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEK61805.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G0A8U2 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 0C989565AF6F69B1

FASTA83091,259
        10         20         30         40         50         60 
MSDPLTSYRK KRDFTVTPEP STAGQASRGG RAFVIQKHWA SRLHYDFRIE LGGAMKSWAI 

        70         80         90        100        110        120 
PKGPSLDPKD KRMAVHVEDH PISYNSFEGD IPAGQYGAGK VIIWDKGSWE AVDGDPLKQY 

       130        140        150        160        170        180 
RSGHLKFELR GHKLHGRWAL IRMKPDSQKK EAWLLIKEKD DYARPALTYS VVDEMPDSVA 

       190        200        210        220        230        240 
GLAVKEERKP APVAASPRKH AKMPAGAVKA ALPTHLAPQL ATLADAAPGG AGWLYEIKFD 

       250        260        270        280        290        300 
GYRLLARVSG KSLRLYTRNG NDWTAKLPAL TAALQRMKLP AGWYDGEIVV LDERGLPDFQ 

       310        320        330        340        350        360 
RLQQAFDSAG SAAAVSYYLF DLPFYDGYDM RGVPLRERRK LLQSLFNTKT PAPVRLSDAF 

       370        380        390        400        410        420 
DVSAKDIVAS ACRMGLEGVI GKRQDSLYVT RRSTDWIKLK CTQRQEFVIG GYTDPQGSRI 

       430        440        450        460        470        480 
GIGSLLLGVH DAHGKLRYAG NVGTGFDARG LAALANKLKA ISAASSPFSG ATGRYRKVHW 

       490        500        510        520        530        540 
VEPLLLAEVS FAEWTADGHI RHSVFHGLRS DKQPQAINRE NAMHIPAAEP QSKTLESLKV 

       550        560        570        580        590        600 
THGERVIDAA SGITKIELIR YYGLVAPLML PHLKGRPVSL LRAPDGLAGQ LFFQKHLGEI 

       610        620        630        640        650        660 
KMHGVRQLAT ALDPGHPPLL EIAGAGGLLS AAQMNVLEFH TWNALKTSIM KPDRMTFDLD 

       670        680        690        700        710        720 
PGEKTTWESV QQAALLLRAF LQQLELEAVI KTSGGKGLHV VVPIKKQHGW DTVKDFSHAI 

       730        740        750        760        770        780 
VDHLAGALPD RFVARSGARN RVGKIFVDYL RNGFGATTAA AWSVRARPGL GVSVPIGWDE 

       790        800        810        820        830 
LEKIKGGAHW TVADIHARLD QGNAPWEANG SRPQSLARPM KILEFKPARK 

« Hide

References

[1]"Complete sequence of Collimonas fungivorans Ter331."
Leveau J.H.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ter331.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002745 Genomic DNA. Translation: AEK61805.1.
RefSeqYP_004752628.1. NC_015856.1.

3D structure databases

ProteinModelPortalG0A8U2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK61805; AEK61805; CFU_1974.
GeneID10992688.
KEGGcfu:CFU_1974.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMASACDMAL.

Enzyme and pathway databases

BioCycCFUN1005048:GJNH-1987-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0A8U2_COLFT
AccessionPrimary (citable) accession number: G0A8U2
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)