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G0A550

- G0A550_METMM

UniProt

G0A550 - G0A550_METMM

Protein
Submitted name:

Type I site-specific deoxyribonuclease, HsdR family

Gene

Metme_1967

Organism
Methylomonas methanica (strain MC09)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. Type I site-specific deoxyribonuclease activity Source: InterPro

    GO - Biological processi

    1. DNA restriction-modification system Source: InterPro

    Enzyme and pathway databases

    BioCyciMMET857087:GH4A-1990-MONOMER.

    Protein family/group databases

    REBASEi36271. Mme9ORF1963P.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Type I site-specific deoxyribonuclease, HsdR familyImported
    Gene namesi
    Ordered Locus Names:Metme_1967Imported
    OrganismiMethylomonas methanica (strain MC09)Imported
    Taxonomic identifieri857087 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaMethylococcalesMethylococcaceaeMethylomonas
    ProteomesiUP000008888: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01153.
    OMAiIRYFVLF.

    Family and domain databases

    Gene3Di3.40.50.300. 2 hits.
    InterProiIPR021810. DUF3387.
    IPR006935. Helicase/UvrB_dom.
    IPR014001. Helicase_ATP-bd.
    IPR027417. P-loop_NTPase.
    IPR007409. Restrct_endonuc_type1_HsdR_N.
    IPR004473. Restrct_endonuc_typeI_HsdR.
    [Graphical view]
    PfamiPF11867. DUF3387. 1 hit.
    PF04313. HSDR_N. 1 hit.
    PF04851. ResIII. 1 hit.
    [Graphical view]
    SMARTiSM00487. DEXDc. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 6 hits.
    TIGRFAMsiTIGR00348. hsdR. 1 hit.
    PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G0A550-1 [UniParc]FASTAAdd to Basket

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    MTEDQLEQEA LGWLAEVGYS TLYGPDLAPD GDNPERDNYL QVVLVERLRS     50
    AIARLNPSIP LAAREDALQQ ILNLEVPGLL AANRHFHRLL VNGVPVEYQK 100
    DGDTRGDRVR LIEFAEPSSN EWLAINQFAI KGPKHSRRPD IILFINGLPL 150
    VLLELKNPAD ENADIWKAFG QIQTYKEQIP DVFQYNEVLV VSDGSEARLG 200
    SLSSDAERFM QWRTIDGITL DPLGQFNELE TLIHGLLNPA TLLDYLRFFV 250
    LFEDDGGLVK KVAGYHQYHA VRAAIQQVVT ASRPDGNHKG GVVWHTQGSG 300
    KSITMTCFAA RVMQETAMEN PTIVVITDRN DLDGQLFGVF SLGQDLLREQ 350
    PVQAETRQDL RAKLDNRPSG GIVFATIQKF MPGADEDSFP VLSDRSNIVV 400
    IADEAHRTQY GFEAKLKTVK TQQTAANEGR VDMAAEYRGM YQVGYAQHLR 450
    DALPNATFVA FTGTPVSLED RDTRAVFGEY IHVYDMQQAK EDGATVAIYF 500
    ESRLAKLALK PEQLPQIDDE VDELAEDEEE DQQAKLKSRW AALEKVVGAE 550
    PRIASVAADL VAHFEERNKA QDGKAMVVAM SREICVHLYN EIIKLRPDWH 600
    SDDPEQGAIK IVMTGSASDK ALLRPHIYSK QQKKRLEKRF KDPADPLRLV 650
    IVRDMWLTGF DAPCVHTLYV DKPMKGHNLM QAIARVNRVF KDKQGGLVVD 700
    YIGIANELKS ALKDYTASQG RGRPTVDAAE AYAVLEEKLD ILRGILHGYD 750
    YSDFLTTGHK RLAGAANHVL GQKDGKKRFA DTSLAMSKAF TLCCTLDEAK 800
    AVREEMAFFQ AVKVILTKPD ISRKKRSDEE RDLAIRQIIN SAVVSEDVVD 850
    IFEAVGLDKP NIGILDEAFL ADVRNLPERN LAVELLERLL EGEIKSRFAG 900
    NVVQEKKFSE LLTNVIKRYQ NRAIETAQVI EELIQMAKKF REAAGRGESL 950
    GLSEDEIRFY DALADNESAV RELSDDTLKL IAHELTENLR QNITVDWSQR 1000
    ESVRAKLRLM VKRILRKYKY PPDQQEAAIE LVLQQAQALG DAWI 1044
    Length:1,044
    Mass (Da):117,250
    Last modified:October 19, 2011 - v1
    Checksum:i925220AE41C6FD4C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002738 Genomic DNA. Translation: AEG00380.1.
    RefSeqiWP_013818627.1. NC_015572.1.
    YP_004512879.1. NC_015572.1.

    Genome annotation databases

    EnsemblBacteriaiAEG00380; AEG00380; Metme_1967.
    GeneIDi10671967.
    KEGGimmt:Metme_1967.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002738 Genomic DNA. Translation: AEG00380.1 .
    RefSeqi WP_013818627.1. NC_015572.1.
    YP_004512879.1. NC_015572.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    REBASEi 36271. Mme9ORF1963P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEG00380 ; AEG00380 ; Metme_1967 .
    GeneIDi 10671967.
    KEGGi mmt:Metme_1967.

    Phylogenomic databases

    KOi K01153.
    OMAi IRYFVLF.

    Enzyme and pathway databases

    BioCyci MMET857087:GH4A-1990-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 2 hits.
    InterProi IPR021810. DUF3387.
    IPR006935. Helicase/UvrB_dom.
    IPR014001. Helicase_ATP-bd.
    IPR027417. P-loop_NTPase.
    IPR007409. Restrct_endonuc_type1_HsdR_N.
    IPR004473. Restrct_endonuc_typeI_HsdR.
    [Graphical view ]
    Pfami PF11867. DUF3387. 1 hit.
    PF04313. HSDR_N. 1 hit.
    PF04851. ResIII. 1 hit.
    [Graphical view ]
    SMARTi SM00487. DEXDc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 6 hits.
    TIGRFAMsi TIGR00348. hsdR. 1 hit.
    PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the aerobic marine methanotroph Methylomonas methanica MC09."
      Boden R., Cunliffe M., Scanlan J., Moussard H., Kits K.D., Klotz M., Jetten M., Vuilleumier S., Han J., Peters L., Mikhailova N., Teshima H., Tapia R., Kyrpides N., Ivanova N., Pagani I., Cheng J.-F., Goodwin L.
      , Han C., Hauser L., Land M., Lapidus A., Lucas S., Pitluck S., Woyke T., Stein L.Y., Murrell C.
      Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MC09.
    2. "Complete sequence of Methylomonas methanica MC09."
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Stein L., Woyke T.
      Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MC09Imported.

    Entry informationi

    Entry nameiG0A550_METMM
    AccessioniPrimary (citable) accession number: G0A550
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3