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F9ZZB2 (F9ZZB2_METMM) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length360 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2561Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1311Substrate By similarity HAMAP-Rule MF_01201
Binding site3041Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F9ZZB2 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: C51CF616BB125FDD

FASTA36039,098
        10         20         30         40         50         60 
MTPAAYVHLD LDAVRHNLAQ AKRYAPNNKI MAVIKANGYG HGITRVAKAL EQADGLAVAR 

        70         80         90        100        110        120 
VDEGVRLRKA GFSQPITVLQ GFVCIDELHL MLQHQLDAVI HTPQQISLLQ QQTGLQAALS 

       130        140        150        160        170        180 
VWLKMDTGMN RLGFKGADFN AAYQQLLNCP LVKQPINLIT HFANADDLLD DKTRKQIDLF 

       190        200        210        220        230        240 
NDAVQGYPGQ RSIANSAGII GWPNVVSDWV RPGLMLYGCS PFAGKTGADF GLRPVMSLHS 

       250        260        270        280        290        300 
RLIAVKNVAA GETVGYSGTW QCQTDTRLGV ISIGYGDGYH RHTRAGAPVL VNGRRAPLIG 

       310        320        330        340        350        360 
RVSMDMITID LNSQPAAQPG DPVTLWGDGL PVEEIARHAD TIPYTLLCGI TQRVQIVEQA 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the aerobic marine methanotroph Methylomonas methanica MC09."
Boden R., Cunliffe M., Scanlan J., Moussard H., Kits K.D., Klotz M., Jetten M., Vuilleumier S., Han J., Peters L., Mikhailova N., Teshima H., Tapia R., Kyrpides N., Ivanova N., Pagani I., Cheng J.-F., Goodwin L. expand/collapse author list , Han C., Hauser L., Land M., Lapidus A., Lucas S., Pitluck S., Woyke T., Stein L.Y., Murrell C.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MC09.
[2]"Complete sequence of Methylomonas methanica MC09."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Stein L., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MC09.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002738 Genomic DNA. Translation: AEG01138.1.
RefSeqYP_004513637.1. NC_015572.1.

3D structure databases

ProteinModelPortalF9ZZB2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG01138; AEG01138; Metme_2756.
GeneID10672758.
KEGGmmt:Metme_2756.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMAITMDQLM.

Enzyme and pathway databases

BioCycMMET857087:GH4A-2781-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF9ZZB2_METMM
AccessionPrimary (citable) accession number: F9ZZB2
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: February 19, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)