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Protein

Glutamate decarboxylase

Gene

Atc_1674

Organism
Acidithiobacillus caldus (strain SM-1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciACAL990288:GJBS-1699-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Atc_1674Imported
OrganismiAcidithiobacillus caldus (strain SM-1)Imported
Taxonomic identifieri990288 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus
ProteomesiUP000006135 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF9ZR18.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F9ZR18-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKSWQEEDG VLQPAFASRS MDCSVPKYRL PDKEMDARTA YQLIHDELML
60 70 80 90 100
DGNARLNLAT FVTTWMEPEA ERLMAETFDK NMIDKDEYPQ TAEIESRCVN
110 120 130 140 150
MLARLFHAPQ QGKAVGVSAI GSSEAVMLAG MALKWRWRQE REKAGQSAQR
160 170 180 190 200
PNLVLGRNVQ VVWEKFCRYW EVEPRYLPMK EGRYTLSPEA VVAAVDAHTI
210 220 230 240 250
GVVAVLGTTF TGEYDPVAAI HEALVPLTEK LGRPVPIHVD AASGGFVAPF
260 270 280 290 300
LQPDLAWDFR LPQVVSINCS GHKYGLVYPG VGWALWRDRD FLPDELIFHV
310 320 330 340 350
NYLGGDMPTF TLNFSRPGNQ IVGQYYNFLR LGREGYTRIL KNLQDTALWL
360 370 380 390 400
AKALEGMGIF QVIGGGDTIP VIALRLRQDV RHYDVFAISD ALRRRGWQVP
410 420 430 440 450
AYTLPADCED IAILRLVIRE GFSRDLAELL LKDFKEAVHE LDHGNAHARV

HKPVFHHN
Length:458
Mass (Da):51,770
Last modified:October 19, 2011 - v1
Checksum:iD4B2B2FBBEA0A4D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002573 Genomic DNA. Translation: AEK58322.1.
RefSeqiWP_004872263.1. NC_015850.1.

Genome annotation databases

EnsemblBacteriaiAEK58322; AEK58322; Atc_1674.
KEGGiacu:Atc_1674.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002573 Genomic DNA. Translation: AEK58322.1.
RefSeqiWP_004872263.1. NC_015850.1.

3D structure databases

ProteinModelPortaliF9ZR18.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEK58322; AEK58322; Atc_1674.
KEGGiacu:Atc_1674.

Phylogenomic databases

KOiK01580.

Enzyme and pathway databases

BioCyciACAL990288:GJBS-1699-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Unraveling the Acidithiobacillus caldus complete genome and its central metabolisms for carbon assimilation."
    You X.Y., Guo X., Zheng H.J., Zhang M.J., Liu L.J., Zhu Y.Q., Zhu B., Wang S.Y., Zhao G.P., Poetsch A., Jiang C.Y., Liu S.J.
    J. Genet. Genomics 38:243-252(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SM-1Imported.

Entry informationi

Entry nameiF9ZR18_ACICS
AccessioniPrimary (citable) accession number: F9ZR18
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 22, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.