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F9ZM41 (F9ZM41_ACICS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Atc_0590 EMBL AEK57240.1, Atc_0603 EMBL AEK57252.1
OrganismAcidithiobacillus caldus (strain SM-1) [Complete proteome] [HAMAP] EMBL AEK57252.1
Taxonomic identifier990288 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F9ZM41 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: BEA63E4E10510447

FASTA39643,178
        10         20         30         40         50         60 
MSKGKFERTK PHVNVGTIGH VDHGKTTLTA ALTKVLSAKF GGEARAYDQI DNAPEERARG 

        70         80         90        100        110        120 
ITIATSHVEY ETENRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPY IVVFMNKADM VDDAELLELV EMEVRELLSK YDFPGDDIPV VIGSALKALE 

       190        200        210        220        230        240 
GDQSDIGEPA IFKLAAAMDS YIPMPERPID KTFLMPIEDV FSISGRGTVV TGRIERGIVK 

       250        260        270        280        290        300 
VGDEIEIVGL RPTSKTTVTG VEMFRKILDQ GQAGDNVGVL LRGTKKDEVE RGQVLAKPGS 

       310        320        330        340        350        360 
IKPHTRFEAE VYVLSKEEGG RHTPFFNGYR PQFYFRTTDV TGAVELPEGV EMVMPGDNIQ 

       370        380        390 
FKVTLIAPIA MEEGLRFAVR EGGRTVGAGV VSKVVE 

« Hide

References

[1]"Unraveling the Acidithiobacillus caldus complete genome and its central metabolisms for carbon assimilation."
You X.Y., Guo X., Zheng H.J., Zhang M.J., Liu L.J., Zhu Y.Q., Zhu B., Wang S.Y., Zhao G.P., Poetsch A., Jiang C.Y., Liu S.J.
J. Genet. Genomics 38:243-252(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SM-1 EMBL AEK57252.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002573 Genomic DNA. Translation: AEK57240.1.
CP002573 Genomic DNA. Translation: AEK57252.1.
RefSeqYP_004747940.1. NC_015850.1.
YP_004747952.1. NC_015850.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK57240; AEK57240; Atc_0590.
AEK57252; AEK57252; Atc_0603.
GeneID10988389.
10990679.
KEGGacu:Atc_0590.
acu:Atc_0603.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycACAL990288:GJBS-600-MONOMER.
ACAL990288:GJBS-613-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF9ZM41_ACICS
AccessionPrimary (citable) accession number: F9ZM41
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 9, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)