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Protein
Submitted name:

Ribulose bisphosphate carboxylase large chain

Gene

Atc_0926

Organism
Acidithiobacillus caldus (strain SM-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciACAL990288:GJBS-941-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase large chainImported
Gene namesi
Ordered Locus Names:Atc_0926Imported
OrganismiAcidithiobacillus caldus (strain SM-1)Imported
Taxonomic identifieri990288 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAcidithiobacilliaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus
Proteomesi
  • UP000006135 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF9ZLP0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 136121RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini146 – 454309RuBisCO_largeInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.
OMAiVIESAHD.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F9ZLP0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGKYEAGVK EYRHTYWAPD YVPLDSDILA CFKIVPQPGV DREEAAAAVA
60 70 80 90 100
AESSTGTWTT VWTDLLTDMD YYKGRAYRIE DVPGDDTAFY AFIAYPIDLF
110 120 130 140 150
EEGSVVNVFT SLVGNVFGFK AVRSLRLEDV RFPLHYVMTC NGPAHGIQVE
160 170 180 190 200
RDKMDKYGRP LLGCTIKPKL GLSAKNYGRA VYEALRGGLD FTKDDENVNS
210 220 230 240 250
QPFMRWRDRF LFVADAIRNA EAQTGERKGH YLNVTAPSPE EMYERAEFAK
260 270 280 290 300
ELGMPIIMHD FLTGGFCANT GLARWCRKNG VLLHIHRAMH AVIDRNPHHG
310 320 330 340 350
IHFRVLTKAL RLSGGDHLHT GTVVGKLEGD RASTLGWIDL LRESYIPEDR
360 370 380 390 400
SRGIFFDQDW GSMPGAFAVA SGGIHVWHMP ALVNIFGDDS VLQFGGGTLG
410 420 430 440 450
HPWGNAAGAA ANRVALEACV EARNRGVEIE KEGKEVLMNA ARHSPELKIA
460 470
LETWKEIKFE FDTVDKLDVQ NR
Length:472
Mass (Da):52,672
Last modified:October 19, 2011 - v1
Checksum:i6B35F9C6839946EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002573 Genomic DNA. Translation: AEK57575.1.
RefSeqiWP_004871237.1. NC_015850.1.

Genome annotation databases

EnsemblBacteriaiAEK57575; AEK57575; Atc_0926.
KEGGiacu:Atc_0926.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002573 Genomic DNA. Translation: AEK57575.1.
RefSeqiWP_004871237.1. NC_015850.1.

3D structure databases

ProteinModelPortaliF9ZLP0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEK57575; AEK57575; Atc_0926.
KEGGiacu:Atc_0926.

Phylogenomic databases

KOiK01601.
OMAiVIESAHD.

Enzyme and pathway databases

BioCyciACAL990288:GJBS-941-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Unraveling the Acidithiobacillus caldus complete genome and its central metabolisms for carbon assimilation."
    You X.Y., Guo X., Zheng H.J., Zhang M.J., Liu L.J., Zhu Y.Q., Zhu B., Wang S.Y., Zhao G.P., Poetsch A., Jiang C.Y., Liu S.J.
    J. Genet. Genomics 38:243-252(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SM-1Imported.

Entry informationi

Entry nameiF9ZLP0_ACICS
AccessioniPrimary (citable) accession number: F9ZLP0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 13, 2016
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.