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Protein
Submitted name:

Superoxide dismutase Mn

Gene

Atc_1008

Organism
Acidithiobacillus caldus (strain SM-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciACAL990288:GJBS-1026-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase MnImported
Gene namesi
Ordered Locus Names:Atc_1008Imported
OrganismiAcidithiobacillus caldus (strain SM-1)Imported
Taxonomic identifieri990288 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus
ProteomesiUP000006135: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF9ZL71.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

F9ZL71-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSEYTVREEL KPSGLDGISD DQINDHWGLY KGYVTQSNAL HKELEEMRAA
60 70 80 90 100
GKTGTLAYAD RRRRFGFEYN GMVLHEYYFA QLKPGTTMDQ APHFKAAVAE
110 120 130 140 150
QFGSADAWHE DLMSAAKSRA IGWAICYYDG TTGQINNHFI QLHEDGNIGG
160 170 180 190 200
FVPLVVVDVW EHAYMVDWKA LGRPDYLASL HKNINWPVVE ARYQAAKSGQ

IFKRF
Length:205
Mass (Da):23,313
Last modified:October 19, 2011 - v1
Checksum:i847FE4D4038073DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002573 Genomic DNA. Translation: AEK57657.1.
RefSeqiYP_004748357.1. NC_015850.1.

Genome annotation databases

EnsemblBacteriaiAEK57657; AEK57657; Atc_1008.
GeneIDi10988794.
KEGGiacu:Atc_1008.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002573 Genomic DNA. Translation: AEK57657.1.
RefSeqiYP_004748357.1. NC_015850.1.

3D structure databases

ProteinModelPortaliF9ZL71.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEK57657; AEK57657; Atc_1008.
GeneIDi10988794.
KEGGiacu:Atc_1008.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciACAL990288:GJBS-1026-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Unraveling the Acidithiobacillus caldus complete genome and its central metabolisms for carbon assimilation."
    You X.Y., Guo X., Zheng H.J., Zhang M.J., Liu L.J., Zhu Y.Q., Zhu B., Wang S.Y., Zhao G.P., Poetsch A., Jiang C.Y., Liu S.J.
    J. Genet. Genomics 38:243-252(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SM-1Imported.

Entry informationi

Entry nameiF9ZL71_ACICS
AccessioniPrimary (citable) accession number: F9ZL71
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: February 4, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.