F9ZCA1 (F9ZCA1_ODOSD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ADY32347.1
EC=4.1.1.15 EMBL ADY32347.1

Gene names

Ordered Locus Names:

Odosp_1307

Organism

Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) (Bacteroides splanchnicus) [Complete proteome] [HAMAP] EMBL ADY32347.1

Taxonomic identifier

709991 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidia › Bacteroidales › Porphyromonadaceae › Odoribacter › Odoribacter splanchnicus

Protein attributes

Sequence length	465 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ADY32347.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F9ZCA1 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: CE96508C28C74546	FASTA	465	53,225
	10 20 30 40 50 60 MKTENPNTPI FGTPEEARVA PKFEMPKTSM PGEVAYQLVH DEAMMDGNAR LNLATFVTTW 70 80 90 100 110 120 MDDYARRVMT ENMDKNMIDK TEYPQTAEIE RRCVNIIAKL WHSPEPPYCT GTSTVGSSEA 130 140 150 160 170 180 CMLGGIAALK RWQKRRRAKG LPTNKPNFII STCMQVVWEK FAIYWDVEMR MVPVTMEKIT 190 200 210 220 230 240 MDPQDVVGMC DENTICVVPI QGVTITGLND NVKEINDALD KLNAEKGWEI CIHVDAATGG 250 260 270 280 290 300 FIHPFIDPDT VWDFRLKWVL SISVSGHKFG LVYPGVGWVV WKDKQYLPEE MNFAVNYLGA 310 320 330 340 350 360 NIPSISINFS RPGNQVLAQY YQFLRLGMEG YRQIQQNCID VCLYLKQQLK EMGIFEFFSD 370 380 390 400 410 420 DMPNPLFIWK LKNDSSRKWT LYDLSDALHA QGWQVPAYTM PKNMEDVVIM RVVVRQGTGK 430 440 450 460 DLADLLVKDI KTNIAQLNQL QEPTNSAILW NKREPQKPRG FNHSR

References

[1]

"Complete genome sequence of Odoribacter splanchnicus type strain (1651/6)." US DOE Joint Genome Institute (JGI-PGF) Goker M., Gronow S., Zeytun A., Nolan M., Lucas S., Lapidus A., Hammon N., Deshpande S., Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K., Ovchinikova G., Pati A., Tapia R., Han C. , Goodwin L., Chen A., Palaniappan K., Land M., Hauser L., Jeffries C.D., Brambilla E.M., Rohde M., Detter J.C., Woyke T., Bristow J., Markowitz V., Hugenholtz P., Eisen J.A., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 4:200-209(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002544 Genomic DNA. Translation: ADY32347.1.
RefSeq	YP_004252527.1. NC_015160.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY32347; ADY32347; Odosp_1307.
GeneID	10253026.
KEGG	osp:Odosp_1307.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
OMA	PMDKEHM.
Enzyme and pathway databases
BioCyc	OSPL709991:GI68-1323-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F9ZCA1_ODOSD

Accession

Primary (citable) accession number: F9ZCA1

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)