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Protein

Glutamate decarboxylase

Gene

Odosp_1307

Organism
Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) (Bacteroides splanchnicus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciOSPL709991:GI68-1323-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Odosp_1307Imported
OrganismiOdoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) (Bacteroides splanchnicus)Imported
Taxonomic identifieri709991 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaeOdoribacter
ProteomesiUP000006657: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiDPDLVWD.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F9ZCA1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTENPNTPI FGTPEEARVA PKFEMPKTSM PGEVAYQLVH DEAMMDGNAR
60 70 80 90 100
LNLATFVTTW MDDYARRVMT ENMDKNMIDK TEYPQTAEIE RRCVNIIAKL
110 120 130 140 150
WHSPEPPYCT GTSTVGSSEA CMLGGIAALK RWQKRRRAKG LPTNKPNFII
160 170 180 190 200
STCMQVVWEK FAIYWDVEMR MVPVTMEKIT MDPQDVVGMC DENTICVVPI
210 220 230 240 250
QGVTITGLND NVKEINDALD KLNAEKGWEI CIHVDAATGG FIHPFIDPDT
260 270 280 290 300
VWDFRLKWVL SISVSGHKFG LVYPGVGWVV WKDKQYLPEE MNFAVNYLGA
310 320 330 340 350
NIPSISINFS RPGNQVLAQY YQFLRLGMEG YRQIQQNCID VCLYLKQQLK
360 370 380 390 400
EMGIFEFFSD DMPNPLFIWK LKNDSSRKWT LYDLSDALHA QGWQVPAYTM
410 420 430 440 450
PKNMEDVVIM RVVVRQGTGK DLADLLVKDI KTNIAQLNQL QEPTNSAILW
460
NKREPQKPRG FNHSR
Length:465
Mass (Da):53,225
Last modified:October 19, 2011 - v1
Checksum:iCE96508C28C74546
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002544 Genomic DNA. Translation: ADY32347.1.
RefSeqiYP_004252527.1. NC_015160.1.

Genome annotation databases

EnsemblBacteriaiADY32347; ADY32347; Odosp_1307.
GeneIDi10253026.
KEGGiosp:Odosp_1307.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002544 Genomic DNA. Translation: ADY32347.1.
RefSeqiYP_004252527.1. NC_015160.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADY32347; ADY32347; Odosp_1307.
GeneIDi10253026.
KEGGiosp:Odosp_1307.

Phylogenomic databases

KOiK01580.
OMAiDPDLVWD.

Enzyme and pathway databases

BioCyciOSPL709991:GI68-1323-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6Imported.

Entry informationi

Entry nameiF9ZCA1_ODOSD
AccessioniPrimary (citable) accession number: F9ZCA1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: February 4, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.