Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

F9ZC31

- F9ZC31_ODOSD

UniProt

F9ZC31 - F9ZC31_ODOSD

Protein
Submitted name:

Lytic transglycosylase catalytic

Gene

Odosp_0056

Organism
Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) (Bacteroides splanchnicus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. lytic transglycosylase activity Source: InterPro

    GO - Biological processi

    1. peptidoglycan metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciOSPL709991:GI68-57-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Lytic transglycosylase catalyticImported
    Gene namesi
    Ordered Locus Names:Odosp_0056Imported
    OrganismiOdoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) (Bacteroides splanchnicus)Imported
    Taxonomic identifieri709991 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaeOdoribacter
    ProteomesiUP000006657: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1919 PotentialImportedAdd
    BLAST
    Chaini20 – 524505 PotentialImportedPRO_5000773709Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliF9ZC31.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK08307.
    OMAiWAGYNAG.

    Family and domain databases

    Gene3Di3.10.350.10. 2 hits.
    InterProiIPR018392. LysM_dom.
    IPR023346. Lysozyme-like_dom.
    IPR008258. TGlycosylase-like_SLT.
    IPR000189. Transglyc_AS.
    [Graphical view]
    PfamiPF01476. LysM. 2 hits.
    PF01464. SLT. 1 hit.
    [Graphical view]
    SMARTiSM00257. LysM. 2 hits.
    [Graphical view]
    SUPFAMiSSF53955. SSF53955. 1 hit.
    SSF54106. SSF54106. 2 hits.
    PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    F9ZC31-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIRFLFFAVS CLLYHAVCGV NVVSKDSVAS VEQDTVIENQ IITDSIPESF    50
    LEKLDYYYTS WYTGKRDSTY YVDSLCIAES CKNIVPCNDS VYLLRLDSLQ 100
    SAVPLSFNDI VRTYIELYTV KKRLQVANML GRSEYYFPIF EEALDAECMP 150
    LELKYLPVIE SALNPKALSR AGACGLWQFM YGTGKMYKLE INSYVDERRD 200
    PVKATQAAVR YLNDLYAIYE DWILVIAAYN CGPGNVNKAI RRSGGKKNYW 250
    DIYYHLPRET RGYVPAFIAA NYVFAYYKEH GIFPIESTLP PMCDSIMVND 300
    ALHFEQIAAK LDFSVEELRD LNPQYRADVI PAGFGKSYAL KMPYNHIGSF 350
    IDNQDSIFAC NRSKYFNDND RTADPKNRIK VHAQALGQDG RARLVYTVKS 400
    GDVPGAIAMK FNVRLADLKY WNNLNKRMTI RPGQKLVVYV PEKKANQYKN 450
    KAAYTGKEDN VASAPKVETI DGEFVLYTVR KGENLWSIAK KYPGVSNKDI 500
    MRWNGISENQ VKDIRPGQKL KIKI 524
    Length:524
    Mass (Da):59,841
    Last modified:October 19, 2011 - v1
    Checksum:i861E040689DACB7E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002544 Genomic DNA. Translation: ADY31171.1.
    RefSeqiWP_013610418.1. NC_015160.1.
    YP_004251351.1. NC_015160.1.

    Genome annotation databases

    EnsemblBacteriaiADY31171; ADY31171; Odosp_0056.
    GeneIDi10251760.
    KEGGiosp:Odosp_0056.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002544 Genomic DNA. Translation: ADY31171.1 .
    RefSeqi WP_013610418.1. NC_015160.1.
    YP_004251351.1. NC_015160.1.

    3D structure databases

    ProteinModelPortali F9ZC31.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADY31171 ; ADY31171 ; Odosp_0056 .
    GeneIDi 10251760.
    KEGGi osp:Odosp_0056.

    Phylogenomic databases

    KOi K08307.
    OMAi WAGYNAG.

    Enzyme and pathway databases

    BioCyci OSPL709991:GI68-57-MONOMER.

    Family and domain databases

    Gene3Di 3.10.350.10. 2 hits.
    InterProi IPR018392. LysM_dom.
    IPR023346. Lysozyme-like_dom.
    IPR008258. TGlycosylase-like_SLT.
    IPR000189. Transglyc_AS.
    [Graphical view ]
    Pfami PF01476. LysM. 2 hits.
    PF01464. SLT. 1 hit.
    [Graphical view ]
    SMARTi SM00257. LysM. 2 hits.
    [Graphical view ]
    SUPFAMi SSF53955. SSF53955. 1 hit.
    SSF54106. SSF54106. 2 hits.
    PROSITEi PS00922. TRANSGLYCOSYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6Imported.

    Entry informationi

    Entry nameiF9ZC31_ODOSD
    AccessioniPrimary (citable) accession number: F9ZC31
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3