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F9ZC31

- F9ZC31_ODOSD

UniProt

F9ZC31 - F9ZC31_ODOSD

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Protein
Submitted name:

Lytic transglycosylase catalytic

Gene
Odosp_0056
Organism
Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) (Bacteroides splanchnicus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. lytic transglycosylase activity Source: InterPro

GO - Biological processi

  1. peptidoglycan metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciOSPL709991:GI68-57-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Lytic transglycosylase catalyticImported
Gene namesi
Ordered Locus Names:Odosp_0056Imported
OrganismiOdoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) (Bacteroides splanchnicus)Imported
Taxonomic identifieri709991 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaeOdoribacter
ProteomesiUP000006657: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919 PredictedImportedAdd
BLAST
Chaini20 – 524505 PredictedImportedPRO_5000773709Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliF9ZC31.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK08307.
OMAiWAGYNAG.

Family and domain databases

Gene3Di3.10.350.10. 2 hits.
InterProiIPR018392. LysM_dom.
IPR023346. Lysozyme-like_dom.
IPR008258. TGlycosylase-like_SLT.
IPR000189. Transglyc_AS.
[Graphical view]
PfamiPF01476. LysM. 2 hits.
PF01464. SLT. 1 hit.
[Graphical view]
SMARTiSM00257. LysM. 2 hits.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF54106. SSF54106. 2 hits.
PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

F9ZC31-1 [UniParc]FASTAAdd to Basket

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MIRFLFFAVS CLLYHAVCGV NVVSKDSVAS VEQDTVIENQ IITDSIPESF    50
LEKLDYYYTS WYTGKRDSTY YVDSLCIAES CKNIVPCNDS VYLLRLDSLQ 100
SAVPLSFNDI VRTYIELYTV KKRLQVANML GRSEYYFPIF EEALDAECMP 150
LELKYLPVIE SALNPKALSR AGACGLWQFM YGTGKMYKLE INSYVDERRD 200
PVKATQAAVR YLNDLYAIYE DWILVIAAYN CGPGNVNKAI RRSGGKKNYW 250
DIYYHLPRET RGYVPAFIAA NYVFAYYKEH GIFPIESTLP PMCDSIMVND 300
ALHFEQIAAK LDFSVEELRD LNPQYRADVI PAGFGKSYAL KMPYNHIGSF 350
IDNQDSIFAC NRSKYFNDND RTADPKNRIK VHAQALGQDG RARLVYTVKS 400
GDVPGAIAMK FNVRLADLKY WNNLNKRMTI RPGQKLVVYV PEKKANQYKN 450
KAAYTGKEDN VASAPKVETI DGEFVLYTVR KGENLWSIAK KYPGVSNKDI 500
MRWNGISENQ VKDIRPGQKL KIKI 524
Length:524
Mass (Da):59,841
Last modified:October 19, 2011 - v1
Checksum:i861E040689DACB7E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002544 Genomic DNA. Translation: ADY31171.1.
RefSeqiWP_013610418.1. NC_015160.1.
YP_004251351.1. NC_015160.1.

Genome annotation databases

EnsemblBacteriaiADY31171; ADY31171; Odosp_0056.
GeneIDi10251760.
KEGGiosp:Odosp_0056.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002544 Genomic DNA. Translation: ADY31171.1 .
RefSeqi WP_013610418.1. NC_015160.1.
YP_004251351.1. NC_015160.1.

3D structure databases

ProteinModelPortali F9ZC31.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADY31171 ; ADY31171 ; Odosp_0056 .
GeneIDi 10251760.
KEGGi osp:Odosp_0056.

Phylogenomic databases

KOi K08307.
OMAi WAGYNAG.

Enzyme and pathway databases

BioCyci OSPL709991:GI68-57-MONOMER.

Family and domain databases

Gene3Di 3.10.350.10. 2 hits.
InterProi IPR018392. LysM_dom.
IPR023346. Lysozyme-like_dom.
IPR008258. TGlycosylase-like_SLT.
IPR000189. Transglyc_AS.
[Graphical view ]
Pfami PF01476. LysM. 2 hits.
PF01464. SLT. 1 hit.
[Graphical view ]
SMARTi SM00257. LysM. 2 hits.
[Graphical view ]
SUPFAMi SSF53955. SSF53955. 1 hit.
SSF54106. SSF54106. 2 hits.
PROSITEi PS00922. TRANSGLYCOSYLASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6.

Entry informationi

Entry nameiF9ZC31_ODOSD
AccessioniPrimary (citable) accession number: F9ZC31
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 3, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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