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F9YZ00 (F9YZ00_PROAA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=1.1.1.42 EMBL AEE72951.1
Gene names
Name:icd EMBL AEE72951.1
ORF Names:PAZ_c18100 EMBL AEE72951.1
OrganismPropionibacterium acnes 266 [Complete proteome] EMBL AEE72951.1
Taxonomic identifier909952 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaePropionibacteriaceaePropionibacterium

Protein attributes

Sequence length734 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region130 – 1378Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3471Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5421Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5461Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1431Substrate By similarity
Binding site5411Substrate By similarity
Site2521Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4171Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
F9YZ00 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 5F5479981DA082A8

FASTA73479,939
        10         20         30         40         50         60 
MPTIVWTKID EAPALASYSL LPIVEGFLDG SGIDITTSDI SLAGRILAQF PDRLNEDQKV 

        70         80         90        100        110        120 
ADHLAELGEL TGSPDANIIK LPNISASVPQ LKAAIAELQS QGYELPDFPD KPSTDEEREI 

       130        140        150        160        170        180 
AARYATVLGS AVNPVLRQGN SDRRAPTAVK AYAKAHPHRM GQWTDQVKAR VAHMDHGDFF 

       190        200        210        220        230        240 
DHEESFVSRG QDLDVVLIGT DGSETTLASG IKTLDGEIVD ATFMSVDALD EFYASSLAQA 

       250        260        270        280        290        300 
NEEDLLWSVH LKATMMKVSD PVLFGHAVRT FLVDVFDKYG DDLNSVGVNP DLGLGDLYTR 

       310        320        330        340        350        360 
LEKLPAERAT AIKAAIDSAF AARPALAMVD SDNGITNLHA GNLVIIDASM PTVVRDSGCM 

       370        380        390        400        410        420 
WNAEGKRQET LACIPDRSYA TMYAAIMDDC REHGALDPAT MGDVPNVGLM AQKAEEYGSH 

       430        440        450        460        470        480 
PTTFIVPHDG RVEVRCGDEV LTNQQVEAGD VWRMSRVRDI PVRDWVRLAI ERARITNTPA 

       490        500        510        520        530        540 
VFWLDKNRAH DARVIEKVKA YLPEHEGLDI RILAPADAMK FTLARIRRGE DTISVTGNVL 

       550        560        570        580        590        600 
RDYLTDVFPI LEIGTSAKML SVVPLLAGGG LFETGAGGSA PKHVAQFVAE DYLRWDSLGE 

       610        620        630        640        650        660 
FCALGACLEH IDQTSEGTKA GILAATLDKA IGAFLENDRS PARKLGQSDN RGSHYWLARY 

       670        680        690        700        710        720 
WASELAAQHD DAELADRFSD VATELAARED QILKELNGVQ GSPVDMGGYY HPDEELVAEA 

       730 
MRPSTTFNAI IESL 

« Hide

References

[1]Brzuszkiewicz E.B., Thuermer A., Wollherr A., Liesegang H., Lehmann R., Gottschalk G., Brueggemann H., Daniel R.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 266 EMBL AEE72951.1.
[2]"Comparative Genomics and Transcriptomics of Propionibacterium acnes."
Brzuszkiewicz E., Weiner J., Wollherr A., Thurmer A., Hupeden J., Lomholt H.B., Kilian M., Gottschalk G., Daniel R., Mollenkopf H.J., Meyer T.F., Bruggemann H.
PLoS ONE 6:E21581-E21581(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 266 EMBL AEE72951.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002409 Genomic DNA. Translation: AEE72951.1.
RefSeqYP_005942982.1. NC_017534.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE72951; AEE72951; PAZ_c18100.
GeneID12533596.
KEGGpaw:PAZ_c18100.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Enzyme and pathway databases

BioCycPACN909952:GLIJ-1802-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF9YZ00_PROAA
AccessionPrimary (citable) accession number: F9YZ00
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 9, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)