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F9YMD0 (F9YMD0_BRUPB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL AEK55785.1
Gene names
Name:gadB EMBL AEK55785.1
Ordered Locus Names:BPI_II337 EMBL AEK55785.1
OrganismBrucella pinnipedialis (strain NCTC 12890 / BCCN 94-73 / B2/94) [Complete proteome] [HAMAP] EMBL AEK55785.1
Taxonomic identifier520461 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length472 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
F9YMD0 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: CD0FDF6A743E0A60

FASTA47253,171
        10         20         30         40         50         60 
MKITLEVIMT GSNYPARDLI ASVFGTEALQ EIAASRGFRE KEMQANAVYQ IIHDELFLDG 

        70         80         90        100        110        120 
NARQNLATFC QTWDDDYVHK LMDLSINKNW IDKEEYPQSA AIDLRCVNMV ADLWNAPKFA 

       130        140        150        160        170        180 
DNATGTNTIG SSEACMLGGM AMKWRWRKKM QEMGKPTDKP NFVCGPVQVC WHKFARYWDV 

       190        200        210        220        230        240 
EIREIPMEPG RLFMGPEQML EAVDENTIGV VPTFGVTYTG NYEFPEPLQD ALDKLQKTKG 

       250        260        270        280        290        300 
LDIDIHVDAA SGGFLAPFCA PDIPWDFRLP RVKSISASGH KYGLAPLGCG WVVWRDKEAL 

       310        320        330        340        350        360 
PEELIFNVDY LGGQVGTFAI NFSRPAGQVI SQYYEFMRLG REGYTKVQQA AYRVAQYIAR 

       370        380        390        400        410        420 
EIEPLGPYEF ICAGEEKGGI PAVCFRIREG EDPGYSLYDL SERLRLTGWQ VPAFALSGKA 

       430        440        450        460        470 
SDITVMRVMC RRGFEMDLAA LFIRDFKAGI EFFKSHPSPK ITPSMGTGFH HT 

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References

[1]"The genome sequence of Brucella pinnipedialis B2/94 sheds light on the evolutionary history of the genus Brucella."
Audic S., Lescot M., Claverie J.M., Cloeckaert A., Zygmunt M.S.
BMC Evol. Biol. 11:200-200(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCTC 12890 / BCCN 94-73 / B2/94.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002079 Genomic DNA. Translation: AEK55785.1.
RefSeqYP_004757553.1. NC_015858.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK55785; AEK55785; BPI_II337.
GeneID10995552.
KEGGbpp:BPI_II337.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycBPIN520461:GJF0-2577-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF9YMD0_BRUPB
AccessionPrimary (citable) accession number: F9YMD0
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)