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F9Y0G9 (F9Y0G9_BIFBU) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length763 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F9Y0G9 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: CDC6E723B4CA4024

FASTA76383,101
        10         20         30         40         50         60 
MSHIPNQIHQ TWNSALLPEQ GGTLHAAFHV ATDGMLLEAR NAERVALAVT VSRGSLVVEA 

        70         80         90        100        110        120 
PEDHIVLDVE DTYGVQFGGV HDLHITFGDF GTRIYLDGYQ AFACATNICP SKYAQAGVFH 

       130        140        150        160        170        180 
CANEAHIGVE RLECFSEAWT SERIQGSVPV PQPDIEFAAA YLADKDVKTL HGVTDGTIYA 

       190        200        210        220        230        240 
QFRVRGVGQF GTILAARDDD RQIMNVDIDD DGFVYRAFVK GQWCEYRAHG DWNDGGWHDL 

       250        260        270        280        290        300 
VIRAFRGAVD IYVDGNMETH QPGQVFFGDL EGLSYVSIGE DTAGVRLCGE VRGGGLFLYP 

       310        320        330        340        350        360 
LGEGQIRKIS DVPPTTDTAL FDKGYEGSAS YRIPSLVTTP SGVTIAGADQ RVVISNDAPN 

       370        380        390        400        410        420 
EIHFVVRRSL DSGQTWLPLQ TVIAFPGDGL DGASVIDSCI VCDRETGRVT VVIDHFPGGR 

       430        440        450        460        470        480 
GFANVEKGLG LDARGRLILH DGEGAEYLLQ PDGAVTSLDG EATSYRVDED GNVTRDGESA 

       490        500        510        520        530        540 
GNIYLKEGVD PHESLLTART SYLVEVHSDD DGETWSKPRH INHMVKEGWM GFLGTSPGNG 

       550        560        570        580        590        600 
IQLSAGKHRG RLLIPYYCTG TSPKFNAGGA LISDDGGQTW RRGKAINEGR VVNGKVVDER 

       610        620        630        640        650        660 
DVRDDDATTH ESVFVERANG DVLCLFRNQH HLGRVGKAVS HDGGDTWETV EFDPDLPDIF 

       670        680        690        700        710        720 
SQPNAVTVPS KAGEEPGCAS DRIVFANASL MRPYRGCGVL RLSEDGGRTW ARNRCFNPYH 

       730        740        750        760 
YVYQCMSVLP DGAIGLSWER ETAGVYFTHL PLSWFGVKSA AEE 

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References

[1]"Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor."
O'Connell Motherway M., Zomer A., Leahy S.C., Reunanen J., Bottacini F., Claesson M.J., O'Brien F., Flynn K., Casey P.G., Moreno Munoz J.A., Kearney B., Houston A.M., O'Mahony C., Higgins D.G., Shanahan F., Palva A., de Vos W.M., Fitzgerald G.F. expand/collapse author list , Ventura M., O'Toole P.W., van Sinderen D.
Proc. Natl. Acad. Sci. U.S.A. 108:11217-11222(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCIMB 8807 / UCC2003.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000303 Genomic DNA. Translation: ABE94880.1.
RefSeqYP_007554019.1. NC_020517.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE94880; ABE94880; Bbr_0171.
GeneID14789536.
KEGGbbru:Bbr_0171.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Family and domain databases

Gene3D2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
ProtoNetSearch...

Entry information

Entry nameF9Y0G9_BIFBU
AccessionPrimary (citable) accession number: F9Y0G9
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: December 11, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)