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Protein

Glutamate decarboxylase

Gene

MYCGRDRAFT_70646

Organism
Zymoseptoria tritici (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus) (Septoria tritici)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. cellular response to oxidative stress Source: EnsemblFungi
  2. glutamate catabolic process Source: EnsemblFungi
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:MYCGRDRAFT_70646Imported
OrganismiZymoseptoria tritici (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus) (Septoria tritici)Imported
Taxonomic identifieri336722 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesDothideomycetidaeCapnodialesMycosphaerellaceaeZymoseptoria
ProteomesiUP000008062 Componenti: Chromosome 4

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: EnsemblFungi
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiF9X855.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F9X855-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALASHVDPD ELMAQLHKSP HHQHGRGSSA VSHITPYSSR YNAQSELSKF
60 70 80 90 100
KIPHDGAPAD AVHQMLKDEL DLDGRPNLNL ASFVGTYMER EAEQLMVENL
110 120 130 140 150
SKNMSDADEY PAMMQMHARC VSIIAHMWNV QKGEKAIGSA TTGSSEAIHL
160 170 180 190 200
GGLAMKRRWQ EKRQAAGKDT SKPNIIMGAN AQVALEKFAR YFEVEARILP
210 220 230 240 250
VSAKSNYRLD PELVKQNIDE NTIGIFVILG STYTGHYEPV EEISNILDAY
260 270 280 290 300
EKETGVDIPI HVDAASGGFI APFTNAKAGG PKWDFALPRV KSINVSGHKF
310 320 330 340 350
GLVYAGVGWI IWRDESYLPK HLVFELHYLG GTEESYTLNF SRPGAQIIAQ
360 370 380 390 400
YFNLIHLGFT GYRAIMENAL SNARLLSKSL ESTGWYKCVS DIHRPKGQHE
410 420 430 440 450
YQKGVIAPTK EGETSADYNA GLPVVAFALT DEFKQKYPHV KQVSVSNLLR
460 470 480 490 500
AKQYIIPNYP LPPNEEKLEI LRVVVRESMS LDLLDRLITD ICEVTENIMN
510 520 530 540
TDAVDMQVYQ PASSNTTTEK KHSSRGLGAH EKHAAKRPMS EGVHRTVC
Length:548
Mass (Da):60,984
Last modified:October 19, 2011 - v1
Checksum:i98BF5B7335E77A34
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM001199 Genomic DNA. Translation: EGP88556.1.
RefSeqiXP_003853580.1. XM_003853532.1.

Genome annotation databases

EnsemblFungiiMycgr3T70646; Mycgr3P70646; Mycgr3G70646.
GeneIDi13400852.
KEGGiztr:MYCGRDRAFT_70646.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM001199 Genomic DNA. Translation: EGP88556.1.
RefSeqiXP_003853580.1. XM_003853532.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiMycgr3T70646; Mycgr3P70646; Mycgr3G70646.
GeneIDi13400852.
KEGGiztr:MYCGRDRAFT_70646.

Phylogenomic databases

InParanoidiF9X855.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis."
    Goodwin S.B., Ben M'barek S., Dhillon B., Wittenberg A.H.J., Crane C.F., Hane J.K., Foster A.J., Van der Lee T.A.J., Grimwood J., Aerts A., Antoniw J., Bailey A., Bluhm B., Bowler J., Bristow J., van der Burgt A., Canto-Canche B., Churchill A.C.L.
    , Conde-Ferraez L., Cools H.J., Coutinho P.M., Csukai M., Dehal P., De Wit P., Donzelli B., van de Geest H.C., van Ham R.C.H.J., Hammond-Kosack K.E., Henrissat B., Kilian A., Kobayashi A.K., Koopmann E., Kourmpetis Y., Kuzniar A., Lindquist E., Lombard V., Maliepaard C., Martins N., Mehrabi R., Nap J.P.H., Ponomarenko A., Rudd J.J., Salamov A., Schmutz J., Schouten H.J., Shapiro H., Stergiopoulos I., Torriani S.F.F., Tu H., de Vries R.P., Waalwijk C., Ware S.B., Wiebenga A., Zwiers L.-H., Oliver R.P., Grigoriev I.V., Kema G.H.J.
    PLoS Genet. 7:E1002070-E1002070(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CBS 115943 / IPO323Imported.

Entry informationi

Entry nameiF9X855_ZYMTI
AccessioniPrimary (citable) accession number: F9X855
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 1, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.