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F9X2V5 (F9X2V5_MYCGM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length964 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
F9X2V5 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: C1CE5B7451D732CF

FASTA964110,023
        10         20         30         40         50         60 
MYGHGSMTQD EMDEKYPGRP KNHAKTLPFH ELYTTLFNPL NENKKKPTGP SIARKKEGPH 

        70         80         90        100        110        120 
GQGQAPHEAR RSIIDRFISR WRKQVGNDIF PAIRLIVPEK DRERGMYGIK EMTLGKLLVR 

       130        140        150        160        170        180 
VMKINKDSED GYNLLHWKLP GVKASSAMAG DFAGRCFEVI SKRPMRQTPG DMTIAQVNEM 

       190        200        210        220        230        240 
LDRLSVAQKE ENQRPIIEEF YNRMCAEEMM WLIRMILRQM KVGASERTFF DVWHQDAENL 

       250        260        270        280        290        300 
FNISSNLRRV CWELWDPDVR LEGDSAGIAL MQCFQPQLAA FQMRSMEQMV ARMKPTEEDA 

       310        320        330        340        350        360 
EFWIEEKLDG ERMQLHMVED DQIPGGKRFG FWSRKAKDYT YLYGKHFEDD NSALTRHIKN 

       370        380        390        400        410        420 
AFNEGVRNII LDGEMITWDP KEQALVPFGT LKTAALSEQQ NPFSTGNRPV FRIFDCLFLN 

       430        440        450        460        470        480 
DKDLTHYTLR VRHEALLKSV TSIDQRMEIH EHQKATQASE IEPVLRKVVA EASEGLVLKN 

       490        500        510        520        530        540 
PRSEYRLNER NDDWIKVKPE YMTEFGESLD CIVVGGYYGS GKRGGGLSSF LCGLKPQQAI 

       550        560        570        580        590        600 
FSSQNRNINP QMVLSFFKVG GGFAASDYAE IRHRTEGKWT DWNAKKPPTD WVVLGGGDRQ 

       610        620        630        640        650        660 
FEKPDVWIKP EDSIVLSVKA ASVTGTTQFA TGCTLRFPRF KKLRTDKDWT QALTQDEFNA 

       670        680        690        700        710        720 
LRKRVEAEVE EKKMKIDDTR KQKVGPKRKK RELVIQGQED AVRAPYAGPA TKVFEGLSFF 

       730        740        750        760        770        780 
VMTEAPKPLK KTKAELEQLI KANGGNVVAS EKDPDTIIIA DRNMVKVASI SKHDKRSIIR 

       790        800        810        820        830        840 
PSWLLDCVRQ SEIDIGRPAL LLPLEKFHLF HTASAEQGRF DDNVDEYGDS YARDITTEEL 

       850        860        870        880        890        900 
LALCNAMPSK MEDGLNPDEV LEQFHDHGHE LDAMKGFMFR GTTAYFDDVP AEAIRLFKFA 

       910        920        930        940        950        960 
GGQIADSIED DQLTHVVLHT GCSPAATRKA VSSKQQLPRI VTESWVADSW SEATRLDEEQ 


FVPS 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM001197 Genomic DNA. Translation: EGP90536.1.
RefSeqXP_003855560.1. XM_003855512.1.

3D structure databases

ProteinModelPortalF9X2V5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiMycgr3T68344; Mycgr3P68344; Mycgr3G68344.
GeneID13399568.
KEGGztr:MYCGRDRAFT_68344.

Phylogenomic databases

KOK10777.
OrthoDBEOG7QC84G.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF9X2V5_MYCGM
AccessionPrimary (citable) accession number: F9X2V5
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 22, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)