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F9X2V5

- F9X2V5_MYCGM

UniProt

F9X2V5 - F9X2V5_MYCGM

Protein

DNA ligase

Gene

MYCGRDRAFT_68344

Organism
Mycosphaerella graminicola (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus) (Septoria tritici)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:MYCGRDRAFT_68344Imported
    OrganismiMycosphaerella graminicola (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus) (Septoria tritici)Imported
    Taxonomic identifieri336722 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesDothideomycetidaeCapnodialesMycosphaerellaceaeZymoseptoria
    ProteomesiUP000008062: Chromosome 2

    Structurei

    3D structure databases

    ProteinModelPortaliF9X2V5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    KOiK10777.
    OrthoDBiEOG7QC84G.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProiIPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 2 hits.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F9X2V5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYGHGSMTQD EMDEKYPGRP KNHAKTLPFH ELYTTLFNPL NENKKKPTGP    50
    SIARKKEGPH GQGQAPHEAR RSIIDRFISR WRKQVGNDIF PAIRLIVPEK 100
    DRERGMYGIK EMTLGKLLVR VMKINKDSED GYNLLHWKLP GVKASSAMAG 150
    DFAGRCFEVI SKRPMRQTPG DMTIAQVNEM LDRLSVAQKE ENQRPIIEEF 200
    YNRMCAEEMM WLIRMILRQM KVGASERTFF DVWHQDAENL FNISSNLRRV 250
    CWELWDPDVR LEGDSAGIAL MQCFQPQLAA FQMRSMEQMV ARMKPTEEDA 300
    EFWIEEKLDG ERMQLHMVED DQIPGGKRFG FWSRKAKDYT YLYGKHFEDD 350
    NSALTRHIKN AFNEGVRNII LDGEMITWDP KEQALVPFGT LKTAALSEQQ 400
    NPFSTGNRPV FRIFDCLFLN DKDLTHYTLR VRHEALLKSV TSIDQRMEIH 450
    EHQKATQASE IEPVLRKVVA EASEGLVLKN PRSEYRLNER NDDWIKVKPE 500
    YMTEFGESLD CIVVGGYYGS GKRGGGLSSF LCGLKPQQAI FSSQNRNINP 550
    QMVLSFFKVG GGFAASDYAE IRHRTEGKWT DWNAKKPPTD WVVLGGGDRQ 600
    FEKPDVWIKP EDSIVLSVKA ASVTGTTQFA TGCTLRFPRF KKLRTDKDWT 650
    QALTQDEFNA LRKRVEAEVE EKKMKIDDTR KQKVGPKRKK RELVIQGQED 700
    AVRAPYAGPA TKVFEGLSFF VMTEAPKPLK KTKAELEQLI KANGGNVVAS 750
    EKDPDTIIIA DRNMVKVASI SKHDKRSIIR PSWLLDCVRQ SEIDIGRPAL 800
    LLPLEKFHLF HTASAEQGRF DDNVDEYGDS YARDITTEEL LALCNAMPSK 850
    MEDGLNPDEV LEQFHDHGHE LDAMKGFMFR GTTAYFDDVP AEAIRLFKFA 900
    GGQIADSIED DQLTHVVLHT GCSPAATRKA VSSKQQLPRI VTESWVADSW 950
    SEATRLDEEQ FVPS 964
    Length:964
    Mass (Da):110,023
    Last modified:October 19, 2011 - v1
    Checksum:iC1CE5B7451D732CF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM001197 Genomic DNA. Translation: EGP90536.1.
    RefSeqiXP_003855560.1. XM_003855512.1.

    Genome annotation databases

    EnsemblFungiiMycgr3T68344; Mycgr3P68344; Mycgr3G68344.
    GeneIDi13399568.
    KEGGiztr:MYCGRDRAFT_68344.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM001197 Genomic DNA. Translation: EGP90536.1 .
    RefSeqi XP_003855560.1. XM_003855512.1.

    3D structure databases

    ProteinModelPortali F9X2V5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii Mycgr3T68344 ; Mycgr3P68344 ; Mycgr3G68344 .
    GeneIDi 13399568.
    KEGGi ztr:MYCGRDRAFT_68344.

    Phylogenomic databases

    KOi K10777.
    OrthoDBi EOG7QC84G.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProi IPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 2 hits.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis."
      Goodwin S.B., Ben M'barek S., Dhillon B., Wittenberg A.H.J., Crane C.F., Hane J.K., Foster A.J., Van der Lee T.A.J., Grimwood J., Aerts A., Antoniw J., Bailey A., Bluhm B., Bowler J., Bristow J., van der Burgt A., Canto-Canche B., Churchill A.C.L.
      , Conde-Ferraez L., Cools H.J., Coutinho P.M., Csukai M., Dehal P., De Wit P., Donzelli B., van de Geest H.C., van Ham R.C.H.J., Hammond-Kosack K.E., Henrissat B., Kilian A., Kobayashi A.K., Koopmann E., Kourmpetis Y., Kuzniar A., Lindquist E., Lombard V., Maliepaard C., Martins N., Mehrabi R., Nap J.P.H., Ponomarenko A., Rudd J.J., Salamov A., Schmutz J., Schouten H.J., Shapiro H., Stergiopoulos I., Torriani S.F.F., Tu H., de Vries R.P., Waalwijk C., Ware S.B., Wiebenga A., Zwiers L.-H., Oliver R.P., Grigoriev I.V., Kema G.H.J.
      PLoS Genet. 7:E1002070-E1002070(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CBS 115943 / IPO323Imported.

    Entry informationi

    Entry nameiF9X2V5_MYCGM
    AccessioniPrimary (citable) accession number: F9X2V5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3