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F9X2V5

- F9X2V5_MYCGM

UniProt

F9X2V5 - F9X2V5_MYCGM

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Protein

DNA ligase

Gene
MYCGRDRAFT_68344
Organism
Mycosphaerella graminicola (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus) (Septoria tritici)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:MYCGRDRAFT_68344Imported
OrganismiMycosphaerella graminicola (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus) (Septoria tritici)Imported
Taxonomic identifieri336722 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesDothideomycetidaeCapnodialesMycosphaerellaceaeZymoseptoria
ProteomesiUP000008062: Chromosome 2

Structurei

3D structure databases

ProteinModelPortaliF9X2V5.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK10777.
OrthoDBiEOG7QC84G.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F9X2V5-1 [UniParc]FASTAAdd to Basket

« Hide

MYGHGSMTQD EMDEKYPGRP KNHAKTLPFH ELYTTLFNPL NENKKKPTGP    50
SIARKKEGPH GQGQAPHEAR RSIIDRFISR WRKQVGNDIF PAIRLIVPEK 100
DRERGMYGIK EMTLGKLLVR VMKINKDSED GYNLLHWKLP GVKASSAMAG 150
DFAGRCFEVI SKRPMRQTPG DMTIAQVNEM LDRLSVAQKE ENQRPIIEEF 200
YNRMCAEEMM WLIRMILRQM KVGASERTFF DVWHQDAENL FNISSNLRRV 250
CWELWDPDVR LEGDSAGIAL MQCFQPQLAA FQMRSMEQMV ARMKPTEEDA 300
EFWIEEKLDG ERMQLHMVED DQIPGGKRFG FWSRKAKDYT YLYGKHFEDD 350
NSALTRHIKN AFNEGVRNII LDGEMITWDP KEQALVPFGT LKTAALSEQQ 400
NPFSTGNRPV FRIFDCLFLN DKDLTHYTLR VRHEALLKSV TSIDQRMEIH 450
EHQKATQASE IEPVLRKVVA EASEGLVLKN PRSEYRLNER NDDWIKVKPE 500
YMTEFGESLD CIVVGGYYGS GKRGGGLSSF LCGLKPQQAI FSSQNRNINP 550
QMVLSFFKVG GGFAASDYAE IRHRTEGKWT DWNAKKPPTD WVVLGGGDRQ 600
FEKPDVWIKP EDSIVLSVKA ASVTGTTQFA TGCTLRFPRF KKLRTDKDWT 650
QALTQDEFNA LRKRVEAEVE EKKMKIDDTR KQKVGPKRKK RELVIQGQED 700
AVRAPYAGPA TKVFEGLSFF VMTEAPKPLK KTKAELEQLI KANGGNVVAS 750
EKDPDTIIIA DRNMVKVASI SKHDKRSIIR PSWLLDCVRQ SEIDIGRPAL 800
LLPLEKFHLF HTASAEQGRF DDNVDEYGDS YARDITTEEL LALCNAMPSK 850
MEDGLNPDEV LEQFHDHGHE LDAMKGFMFR GTTAYFDDVP AEAIRLFKFA 900
GGQIADSIED DQLTHVVLHT GCSPAATRKA VSSKQQLPRI VTESWVADSW 950
SEATRLDEEQ FVPS 964
Length:964
Mass (Da):110,023
Last modified:October 19, 2011 - v1
Checksum:iC1CE5B7451D732CF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM001197 Genomic DNA. Translation: EGP90536.1.
RefSeqiXP_003855560.1. XM_003855512.1.

Genome annotation databases

EnsemblFungiiMycgr3T68344; Mycgr3P68344; Mycgr3G68344.
GeneIDi13399568.
KEGGiztr:MYCGRDRAFT_68344.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM001197 Genomic DNA. Translation: EGP90536.1 .
RefSeqi XP_003855560.1. XM_003855512.1.

3D structure databases

ProteinModelPortali F9X2V5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii Mycgr3T68344 ; Mycgr3P68344 ; Mycgr3G68344 .
GeneIDi 13399568.
KEGGi ztr:MYCGRDRAFT_68344.

Phylogenomic databases

KOi K10777.
OrthoDBi EOG7QC84G.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProi IPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 2 hits.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis."
    Goodwin S.B., Ben M'barek S., Dhillon B., Wittenberg A.H.J., Crane C.F., Hane J.K., Foster A.J., Van der Lee T.A.J., Grimwood J., Aerts A., Antoniw J., Bailey A., Bluhm B., Bowler J., Bristow J., van der Burgt A., Canto-Canche B., Churchill A.C.L.
    , Conde-Ferraez L., Cools H.J., Coutinho P.M., Csukai M., Dehal P., De Wit P., Donzelli B., van de Geest H.C., van Ham R.C.H.J., Hammond-Kosack K.E., Henrissat B., Kilian A., Kobayashi A.K., Koopmann E., Kourmpetis Y., Kuzniar A., Lindquist E., Lombard V., Maliepaard C., Martins N., Mehrabi R., Nap J.P.H., Ponomarenko A., Rudd J.J., Salamov A., Schmutz J., Schouten H.J., Shapiro H., Stergiopoulos I., Torriani S.F.F., Tu H., de Vries R.P., Waalwijk C., Ware S.B., Wiebenga A., Zwiers L.-H., Oliver R.P., Grigoriev I.V., Kema G.H.J.
    PLoS Genet. 7:E1002070-E1002070(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CBS 115943 / IPO323.

Entry informationi

Entry nameiF9X2V5_MYCGM
AccessioniPrimary (citable) accession number: F9X2V5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 3, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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