Putative 4-aminobutyrate aminotransferase - Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)

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F9VN77 (F9VN77_SULTO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 15. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative 4-aminobutyrate aminotransferase EMBL BAK54374.1
EC=2.6.1.19 EMBL BAK54374.1

Gene names

Name:	gabT EMBL BAK54374.1
Ordered Locus Names:	STK_07350

Organism

Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) [Complete proteome] [HAMAP] EMBL BAK54374.1

Taxonomic identifier

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus ›

Protein attributes

Sequence length	419 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL BAK54374.1 Transferase
Technical term	3D-structure PDB 2EO5 Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

F9VN77 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 8E356A3B12F7E83F
Show »

419

46,218

        10         20         30         40         50         60 
MLSRKIIEES DIYLATSTRD PELFPLVIDH GEGVWIYDVD GNKYLDFTSG IGVNNLGWPS 

        70         80         90        100        110        120 
HPEVIKIGIE QMQKLAHAAA NDFYNIPQLE LAKKLVTYSP GNFQKKVFFS NSGTEAIEAS 

       130        140        150        160        170        180 
IKVVKNTGRK YIIAFLGGFH GRTFGSISLT ASKAVQRSIV GPFMPGVIHV PYPNPYRNPW 

       190        200        210        220        230        240 
HINGYENPSE LVNRVIEFIE DYIFVNLVPP EEVAGIFFEP IQGEGGYVIP PKNFFAELQK 

       250        260        270        280        290        300 
LAKKYGILLV DDEVQMGLGR TGKLFAIENF NTVPDVITLA KALGGGIMPI GATIFRKDLD 

       310        320        330        340        350        360 
FKPGMHSNTF GGNALACAIG SKVIDIVKDL LPHVNEIGKI FAEELQGLAD DVRGIGLAWG 

       370        380        390        400        410 
LEYNEKKVRD RIIGESFKRG LLLLPAGRSA IRVIPPLVIS EEEAKQGLDI LKKVIKVVK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of an aerobic thermoacidophilic Crenarchaeon, Sulfolobus tokodaii strain7." Kawarabayasi Y., Hino Y., Horikawa H., Jin-no K., Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A., Fukui S., Nagai Y., Nishijima K., Otsuka R., Nakazawa H., Takamiya M., Kato Y., Yoshizawa T. Kikuchi H. DNA Res. 8:123-140(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 16993 / JCM 10545 / NBRC 100140 / 7.
[2]	"Crystal structure of 4-aminobutyrate aminotransferase from Sulfolobus tokodaii strain7." Mizutani H., Kunishima N. Submitted (MAR-2007) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000023 Genomic DNA. Translation: BAK54374.1.

RefSeq

NP_376633.1. NC_003106.2.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2EO5	X-ray	1.90	A	1-419	[»]

ProteinModelPortal

SMR

F9VN77. Positions 1-418.

ModBase

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

BAK54374; BAK54374; STK_07350.

GeneID

KEGG

Organism-specific databases

CMR

Phylogenomic databases

KO

OMA

Family and domain databases

Gene3D

3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.

InterPro

IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]

PANTHER

PTHR11986. PTHR11986. 1 hit.

Pfam

PF00202. Aminotran_3. 1 hit.
[Graphical view]

SUPFAM

SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.

PROSITE

PS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

F9VN77_SULTO

Accession

Primary (citable) accession number: F9VN77

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info