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F9VFM4 (F9VFM4_LACGL) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LCGL_1665 EMBL BAK61125.1
OrganismLactococcus garvieae (strain Lg2) (Enterococcus seriolicida) [Complete proteome] [HAMAP] EMBL BAK61125.1
Taxonomic identifier420890 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus

Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F9VFM4 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: DB24BF8246030A85

FASTA47854,483
        10         20         30         40         50         60 
MTFKKDFLWG GATAANQLEG AFDMDGKGLS VADAMPGGKE RLAILNSPDF DWTIDEDKFV 

        70         80         90        100        110        120 
YPNHKGIDHY HHFKEDIALF AEMGFKAYRF SVAWSRIFPK GNESEPNEAG LKFYDQLIDE 

       130        140        150        160        170        180 
CLKYNIEPVV TISHYEMPLH LAKEYGGWKN RELIEFYVRY AKVLLERYQD KVKYWMTFNE 

       190        200        210        220        230        240 
INSATFFAAL GQGLVPSNGG NDKKNVFQAW HNQFVASALT VEFGHALNKD LQIGCMSIYS 

       250        260        270        280        290        300 
TTYAFDANPV NQIAAQQSIQ EFNYFCNDVQ VRGEYPVFTH RLHKKYGIKT EDLEITKEDL 

       310        320        330        340        350        360 
DTLKKGTVDY IGFSYYMSTV ESKTQEGVEA SGNMVLGGVK NPFLKESEWG WAVDPDGLRY 

       370        380        390        400        410        420 
ALNDLYGRYQ LPLFIVENGL GAIDKVEADG SIQDDYRIDY LRRHIIAMEE AVEDGVDVMG 

       430        440        450        460        470 
YTPWGCIDLV SASTGEMSKR YGFIYVDLDD KIQGTGKRSK KKSFDWYKEV IASNGQRL 

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References

[1]"Complete genome sequence and comparative analysis of the fish pathogen Lactococcus garvieae."
Morita H., Toh H., Oshima K., Yoshizaki M., Kawanishi M., Nakaya K., Suzuki T., Miyauchi E., Ishii Y., Tanabe S., Murakami M., Hattori M.
PLoS ONE 6:E23184-E23184(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Lg2 EMBL BAK61125.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009333 Genomic DNA. Translation: BAK61125.1.
RefSeqYP_005871409.1. NC_017490.1.

3D structure databases

ProteinModelPortalF9VFM4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK61125; BAK61125; LCGL_1665.
GeneID12480239.
KEGGlgv:LCGL_1665.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01223.

Enzyme and pathway databases

BioCycLGAR420890:GLFD-1707-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF9VFM4_LACGL
AccessionPrimary (citable) accession number: F9VFM4
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 22, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)