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F9USZ1 (F9USZ1_LACPL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL CCC77722.1
Gene names
Name:malS EMBL CCC77722.1
Ordered Locus Names:lp_0179 EMBL CCC77722.1
OrganismLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) [Reference proteome] [HAMAP] EMBL CCC77722.1
Taxonomic identifier220668 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length440 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
F9USZ1 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 89CEB4925B2D3F0A

FASTA44049,915
        10         20         30         40         50         60 
MARDTQTQLR NEMIYSVFVR NYSEAGNFAG VTADLQRIKD LGTDILWLLP INPIGEVNRK 

        70         80         90        100        110        120 
GTLGSPYAIK DYRGINPEYG TLADFKALTD RAHELGMKVM LDIVYNHTSP DSVLATEHPE 

       130        140        150        160        170        180 
WFYHDADGQL TNKVGDWSDV KDLDYGHHEL WQYQIDTLLY WSQFVDGYRC DVAPLVPLDF 

       190        200        210        220        230        240 
WLEARKQVNA KYPETLWLAE SAGSGFIEEL RSQGYTGLSD SELYQAFDMT YDYDVFGDFK 

       250        260        270        280        290        300 
DYWQGRSTVE RYVDLLQRQD ATFPGNYVKM RFLENHDNAR MMSLMHSKAE AVNNLTWIFM 

       310        320        330        340        350        360 
QRGIPLIYNG QEFLAEHQPS LFDRDTMVAD RHGDVTPLIQ KLVTIKQLPL LRAADYQLAV 

       370        380        390        400        410        420 
VEEGIVKITY RAAGEALTAW IPLKGQVTAV ATKLAAGSYQ NLLTDGPTEV VDGKLTVDGQ 

       430        440 
PVLIKYVTNT AVTKVADQSN 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Lactobacillus plantarum WCFS1."
Kleerebezem M., Boekhorst J., van Kranenburg R., Molenaar D., Kuipers O.P., Leer R., Tarchini R., Peters S.A., Sandbrink H.M., Fiers M.W.E.J., Stiekema W., Klein Lankhorst R.M., Bron P.A., Hoffer S.M., Nierop Groot M.N., Kerkhoven R., De Vries M., Ursing B., De Vos W.M., Siezen R.J.
Proc. Natl. Acad. Sci. U.S.A. 100:1990-1995(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-793 / NCIMB 8826 / WCFS1.
[2]"Crystal structure of an alpha-amylase from Lactobacillus plantarum."
Bonanno J.B., Dickey M., Bain K.T., Iizuka M., Ozyurt S., Smith D., Wasserman S., Sauder J.M., Burley S.K., Almo S.C.
Submitted (JUN-2008) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 3-440.
[3]"Complete resequencing and reannotation of the Lactobacillus plantarum WCFS1 genome."
Siezen R.J., Francke C., Renckens B., Boekhorst J., Wels M., Kleerebezem M., van Hijum S.A.F.T.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: WCFS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL935263 Genomic DNA. Translation: CCC77722.1.
RefSeqYP_004888236.1. NC_004567.2.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3DHUX-ray2.00A/B/C/D3-440[»]
ProteinModelPortalF9USZ1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

DNASU1061459.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCC77722; CCC77722; lp_0179.
GeneID1061459.
KEGGlpl:lp_0179.

Phylogenomic databases

KOK01176.
OMAIYSGQEY.

Enzyme and pathway databases

BioCycLPLA220668-WGS:GSPK-144-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 2 hits.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF9USZ1_LACPL
AccessionPrimary (citable) accession number: F9USZ1
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 9, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)