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Protein
Submitted name:

Alpha-amylase, maltodextrins and cyclomaltodextrins

Gene

malS

Organism
Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciLPLA220668-WGS:GSPK-144-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase, maltodextrins and cyclomaltodextrinsImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
Ordered Locus Names:lp_0179Imported
OrganismiLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)Imported
Taxonomic identifieri220668 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000000432 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi220668.lp_0179.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3DHUX-ray2.00A/B/C/D3-440[»]
ProteinModelPortaliF9USZ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiIDIVFNH.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 2 hits.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F9USZ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARDTQTQLR NEMIYSVFVR NYSEAGNFAG VTADLQRIKD LGTDILWLLP
60 70 80 90 100
INPIGEVNRK GTLGSPYAIK DYRGINPEYG TLADFKALTD RAHELGMKVM
110 120 130 140 150
LDIVYNHTSP DSVLATEHPE WFYHDADGQL TNKVGDWSDV KDLDYGHHEL
160 170 180 190 200
WQYQIDTLLY WSQFVDGYRC DVAPLVPLDF WLEARKQVNA KYPETLWLAE
210 220 230 240 250
SAGSGFIEEL RSQGYTGLSD SELYQAFDMT YDYDVFGDFK DYWQGRSTVE
260 270 280 290 300
RYVDLLQRQD ATFPGNYVKM RFLENHDNAR MMSLMHSKAE AVNNLTWIFM
310 320 330 340 350
QRGIPLIYNG QEFLAEHQPS LFDRDTMVAD RHGDVTPLIQ KLVTIKQLPL
360 370 380 390 400
LRAADYQLAV VEEGIVKITY RAAGEALTAW IPLKGQVTAV ATKLAAGSYQ
410 420 430 440
NLLTDGPTEV VDGKLTVDGQ PVLIKYVTNT AVTKVADQSN
Length:440
Mass (Da):49,915
Last modified:October 19, 2011 - v1
Checksum:i89CEB4925B2D3F0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL935263 Genomic DNA. Translation: CCC77722.1.
RefSeqiWP_003641774.1. NC_004567.2.
YP_004888236.1. NC_004567.2.

Genome annotation databases

EnsemblBacteriaiCCC77722; CCC77722; lp_0179.
GeneIDi1061459.
KEGGilpl:lp_0179.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL935263 Genomic DNA. Translation: CCC77722.1.
RefSeqiWP_003641774.1. NC_004567.2.
YP_004888236.1. NC_004567.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3DHUX-ray2.00A/B/C/D3-440[»]
ProteinModelPortaliF9USZ1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi220668.lp_0179.

Protocols and materials databases

DNASUi1061459.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCC77722; CCC77722; lp_0179.
GeneIDi1061459.
KEGGilpl:lp_0179.

Phylogenomic databases

KOiK01176.
OMAiIDIVFNH.

Enzyme and pathway databases

BioCyciLPLA220668-WGS:GSPK-144-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 2 hits.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-793 / NCIMB 8826 / WCFS1Imported.
  2. "Crystal structure of an alpha-amylase from Lactobacillus plantarum."
    Bonanno J.B., Dickey M., Bain K.T., Iizuka M., Ozyurt S., Smith D., Wasserman S., Sauder J.M., Burley S.K., Almo S.C.
    Submitted (JUN-2008) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 3-440.
  3. "Complete resequencing and reannotation of the Lactobacillus plantarum WCFS1 genome."
    Siezen R.J., Francke C., Renckens B., Boekhorst J., Wels M., Kleerebezem M., van Hijum S.A.F.T.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: WCFS1.

Entry informationi

Entry nameiF9USZ1_LACPL
AccessioniPrimary (citable) accession number: F9USZ1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 22, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.