Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

F9D229 (F9D229_PREDD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names

BNR/Asp-box repeat protein EMBL AGB28373.1
Gene names
Ordered Locus Names:Prede_1036 EMBL AGB28373.1
ORF Names:HMPREF9136_0907 EMBL EGQ15847.1
OrganismPrevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) (Mitsuokella dentalis) [Complete proteome] [HAMAP] EMBL EGQ15847.1
Taxonomic identifier908937 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesPrevotellaceaePrevotella

Protein attributes

Sequence length456 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AGB28373.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain45 – 456412 Potential EMBL AGB28373.1
PRO_5001097946

Sequences

Sequence LengthMass (Da)Tools
F9D229 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 07577AD870CDDCA6

FASTA45650,868
        10         20         30         40         50         60 
MKNSIPLSQM LMRNNFCRRI KGLRVTPVQL AFVLLVGFPI GTTAQTTDKE VVVFDNVHSE 

        70         80         90        100        110        120 
VPYRIPALAY TRDGRLIAVC DYRISKSDIG INNRNGLWQI NEVMRMSTDN GRTWGAVKTV 

       130        140        150        160        170        180 
AEGNELADDW HAAFGDPCIV ADRESDQILM GCVAGKIGYW GENRSTRGRR QDCVFFRSND 

       190        200        210        220        230        240 
GGHTWGPGEL RTDDIWNLYE GTLPGGQSAH GLFLTSGKIM QSRYVKAGSH YRLYIAHPVR 

       250        260        270        280        290        300 
LDSFDKRMGT FVIYSDDFGK TWRVLGGTAA PASIAQDESK VEELPDGSVL LSCRDKDGGR 

       310        320        330        340        350        360 
RFNVYTYTDP KTAAGTWGEE VMPSNMTRDS INAVNGGIMV VSARQTSTGR PICLLLQSVP 

       370        380        390        400        410        420 
QSPERRTMGF YYKVVTNRTD YATPSRLAAG WVKGLKITDA TACYSTMVLM DDGYIGLLYE 

       430        440        450 
KNSHNDGYDI VFQRLSLDEI TGNQYHYDDT QPCRPT 

« Hide

References

« Hide 'large scale' references
[1]Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V., Kovar C., Mata R., Mathew T., Ngo R. expand/collapse author list , Nguyen L., Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., Petrosino J., Highlander S., Gibbs R.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 3688 EMBL EGQ15847.1.
[2]"Complete sequence of chromosome 1 of Prevotella dentalis DSM 3688."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772.
[3]"Complete sequence of chromosome 1 of Prevotella dentalis DSM 3688."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 3688 EMBL AGB28373.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003368 Genomic DNA. Translation: AGB28373.1.
AFPW01000012 Genomic DNA. Translation: EGQ15847.1.
RefSeqYP_007278403.1. NC_019960.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB28373; AGB28373; Prede_1036.
EGQ15847; EGQ15847; HMPREF9136_0907.
GeneID14374532.
KEGGpdt:Prede_1036.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.
OrthoDBEOG6N3CST.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026948. Sialidase/anhydrosialidase.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF9D229_PREDD
AccessionPrimary (citable) accession number: F9D229
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)