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Protein
Submitted name:

RNA-binding protein fox-1 homolog 1

Gene

RBFOX1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein fox-1 homolog 1Imported
Gene namesi
Name:RBFOX1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000078328.19.
HGNCiHGNC:18222. RBFOX1.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000078328.

PTM / Processingi

Proteomic databases

MaxQBiF8VZY7.
PeptideAtlasiF8VZY7.
PRIDEiF8VZY7.

Expressioni

Gene expression databases

BgeeiENSG00000078328.
ExpressionAtlasiF8VZY7. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliF8VZY7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini117 – 193RRMInterPro annotationAdd BLAST77

Phylogenomic databases

eggNOGiKOG0125. Eukaryota.
ENOG4111WJT. LUCA.
GeneTreeiENSGT00390000013767.

Family and domain databases

CDDicd12407. RRM_FOX1_like. 1 hit.
InterProiView protein in InterPro
IPR034237. FOX1_RRM.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Fragment.

F8VZY7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNCEREQLRG NQEAAAAPDT MAQPYASAQF APPQNGIPAE YTAPHPHPAP
60 70 80 90 100
EYTGQTTVPE HTLNLYPPAQ THSEQSPADT SAQTVSGTAT QTDDAAPTDG
110 120 130 140 150
QPQTQPSENT ENKSQPKRLH VSNIPFRFRD PDLRQMFGQF GKILDVEIIF
160 170 180 190 200
NERGSKGFGF VTFENSADAD RAREKLHGTV VEGRKIEVNN ATARVMTNKK
210 220 230 240 250
TVNPYTNGWK LNPVVGAVYS PEFYAGTVLL CQANQEGSSM YSAPSSLVYT
260
SAMPGFPYPA ATA
Length:263
Mass (Da):28,566
Last modified:September 21, 2011 - v1
Checksum:i56C2D853846B8CE1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei263Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005347 Genomic DNA. No translation available.
AC005364 Genomic DNA. No translation available.
AC005563 Genomic DNA. No translation available.
AC005569 Genomic DNA. No translation available.
AC005737 Genomic DNA. No translation available.
AC012175 Genomic DNA. No translation available.
AC023822 Genomic DNA. No translation available.
AC074051 Genomic DNA. No translation available.
KF495794 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000551752; ENSP00000447281; ENSG00000078328.
UCSCiuc059qmt.1. human.

Similar proteinsi

Entry informationi

Entry nameiF8VZY7_HUMAN
AccessioniPrimary (citable) accession number: F8VZY7
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: January 31, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported