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Protein
Submitted name:

Zinc finger protein ZIC 2

Gene

Zic2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein ZIC 2Imported
Gene namesi
Name:Zic2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 14

Organism-specific databases

MGIiMGI:106679. Zic2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiF8VPV3.
PeptideAtlasiF8VPV3.

Expressioni

Gene expression databases

BgeeiENSMUSG00000061524.
GenevisibleiF8VPV3. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000075283.

Structurei

3D structure databases

ProteinModelPortaliF8VPV3.
SMRiF8VPV3. Positions 249-416.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini304 – 33128C2H2-typeInterPro annotationAdd
BLAST
Domaini332 – 36130C2H2-typeInterPro annotationAdd
BLAST
Domaini362 – 39130C2H2-typeInterPro annotationAdd
BLAST
Domaini392 – 41928C2H2-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118771.
KOiK06235.
OMAiDSAHMGA.
OrthoDBiEOG091G0M59.
TreeFamiTF351425.

Family and domain databases

Gene3Di3.30.160.60. 4 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 2 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 5 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8VPV3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLDAGPQFP AIGVGSFARH HHHSAAAAAA AAAEMQDREL SLAAAQNGFV
60 70 80 90 100
DSAAAHMGAF KLNPGAHELS PGQSSAFTSQ GPGAYPGSAA AAAAAAALGP
110 120 130 140 150
HAAHVGSYSG PPFNSTRDFL FRSRGFGDSA PGGGQHGLFG PGAGGLHHAH
160 170 180 190 200
SDAQGHLLFP GLPEQHGPHA SQNVLNGQMR LGLPGEVFGR SEQYRQVASP
210 220 230 240 250
RTDPYSAAQL HNQYGPMNMN MGMNMAAAAA HHHHHHHHPG AFFRYMRQQC
260 270 280 290 300
IKQELICKWI DPEQLSNPKK SCNKTFSTMH ELVTHVSVEH VGGPEQSNHV
310 320 330 340 350
CFWEECPREG KPFKAKYKLV NHIRVHTGEK PFPCPFPGCG KVFARSENLK
360 370 380 390 400
IHKRTHTGEK PFQCEFEGCD RRFANSSDRK KHMHVHTSDK PYLCKMCDKS
410 420 430 440 450
YTHPSSLRKH MKVHESSPQG SESSPAASSG YESSTPPGLV SPSAEPQSSS
460 470 480 490 500
NLSPAAAAAA AAAAAAAAAV SAVHRGAGSG SSGSGGGSAA GSGGGGGGAG
510 520
GGGGGSSGGG SGTTGGHSGL SSNFNEWYV
Length:529
Mass (Da):54,857
Last modified:September 21, 2011 - v1
Checksum:iADA5CF63365A5829
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC154683 Genomic DNA. No translation available.
RefSeqiNP_033600.3. NM_009574.3.
UniGeneiMm.308936.

Genome annotation databases

EnsembliENSMUST00000075888; ENSMUSP00000075283; ENSMUSG00000061524.
GeneIDi22772.
KEGGimmu:22772.
UCSCiuc007vbd.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC154683 Genomic DNA. No translation available.
RefSeqiNP_033600.3. NM_009574.3.
UniGeneiMm.308936.

3D structure databases

ProteinModelPortaliF8VPV3.
SMRiF8VPV3. Positions 249-416.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000075283.

Proteomic databases

PaxDbiF8VPV3.
PeptideAtlasiF8VPV3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000075888; ENSMUSP00000075283; ENSMUSG00000061524.
GeneIDi22772.
KEGGimmu:22772.
UCSCiuc007vbd.1. mouse.

Organism-specific databases

CTDi7546.
MGIiMGI:106679. Zic2.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118771.
KOiK06235.
OMAiDSAHMGA.
OrthoDBiEOG091G0M59.
TreeFamiTF351425.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000061524.
GenevisibleiF8VPV3. MM.

Family and domain databases

Gene3Di3.30.160.60. 4 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 2 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 5 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiF8VPV3_MOUSE
AccessioniPrimary (citable) accession number: F8VPV3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: September 7, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.