F8VMJ6 (F8VMJ6_SALBC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL CCC32738.1
EC=5.1.1.1 EMBL CCC32738.1

Gene names

Name:	alr EMBL CCC32738.1
Synonyms:	alr2
Ordered Locus Names:	SBG_3692 EMBL CCC32738.1

Organism

Salmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419) [Complete proteome] [HAMAP] EMBL CCC32738.1

Taxonomic identifier

218493 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella › Salmonella bongori

Protein attributes

Sequence length	359 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL CCC32738.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8VMJ6 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: DF8B747D7453F683	FASTA	359	39,086
	10 20 30 40 50 60 MQAATVVINR RALRHNLQRL RELAPASKLV AVVKANAYGH GLLETARTLP DADAFGVARL 70 80 90 100 110 120 EEALRLRAGG IKQPILLLEG FFDAADLPTI SVQRLHTAVH NQEQLAALEA AELAEPVTVW 130 140 150 160 170 180 MKLDTGMHRL GVRPEEAEAF YQRLAHCKNV RQPVNIVSHF ARADEPECGA TEHQLEIFNA 190 200 210 220 230 240 FCGDKPGQRS IAASGGILLW PQSHFDWARP GIILYGVSPL EHKPWGPDFG FQPVMSLTSS 250 260 270 280 290 300 LIAARDHKAG EPVGYGGTWV SERDTRLGVV AMGYGDGYPR AAPSGTPVLV NGREVPIVGR 310 320 330 340 350 VAMDMICVDL GPSAQDKAGD PVVLWGEGLP VERIAEMTKV SAYELITRLT SRVAMKYID

References

[1]

"Salmonella bongori provides insights into the evolution of the Salmonellae." Fookes M., Schroeder G.N., Langridge G.C., Blondel C.J., Mammina C., Connor T.R., Seth-Smith H., Vernikos G.S., Robinson K.S., Sanders M., Petty N.K., Kingsley R.A., Baumler A.J., Nuccio S.P., Contreras I., Santiviago C.A., Maskell D., Barrow P. , Humphrey T., Nastasi A., Roberts M., Frankel G., Parkhill J., Dougan G., Thomson N.R. PLoS Pathog. 7:E1002191-E1002191(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43975 / DSM 13772 / NCTC 12419.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FR877557 Genomic DNA. Translation: CCC32738.1.
RefSeq	YP_004732489.1. NC_015761.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10968786.
KEGG	sbg:SBG_3692.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
BioCyc	SBON218493:GJAH-3741-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8VMJ6_SALBC

Accession

Primary (citable) accession number: F8VMJ6

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	March 6, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)