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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Salmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSBON218493:GJAH-3283-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
Ordered Locus Names:SBG_3258Imported
OrganismiSalmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)Imported
Taxonomic identifieri218493 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000000289 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiFNWHNAT.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

F8VMH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLAAFALTL IPGITIASSW TSPGFPAFSA QEAGRFTSQA TLTKGTRALT
60 70 80 90 100
LHINQQCWQP ADAIKLNQML SLKPCEGTPP QWRLFKDGDY TLTVDTRSGT
110 120 130 140 150
PTLLLSIKTA PERTTQLARQ CPAWDGLPLT LDVSQTFAEG TVVRDYYSGQ
160 170 180 190 200
TDTVQNGQIT LQPADSHGLL LLERAETHVS APFNWHNATV YFVLTDRFRN
210 220 230 240 250
GDPTNDHSYG RHKDGMQEIG TFHGGDLRGL TGKLDYLQQL GVNALWISAP
260 270 280 290 300
FEQIHGWVGG GTKGDFPHYA YHGYYTQDWT TLDANMGSEA DLRALVDGAH
310 320 330 340 350
QRGIRILFDV VMNHTGYATL ADMQEYQFGA LYLSDTERQK ILGNRWTNWR
360 370 380 390 400
PAAGQSWHSF NDYINFSDNA AWEKWWGKKW IRTDIGDYDN SGFDDLTMSL
410 420 430 440 450
AFLPDLKTES TVPSGLPVFY QNKPDTRAKA IANYTPRDYL THWLSQWVRD
460 470 480 490 500
YGIDGFRVDT AKHVELPAWQ QLKTQASAAL ADWKKANPVK ALDDAPFWMT
510 520 530 540 550
GEAWGHGVMK SDYYRYGFDA MINFDYQEQA AKAVDCLAEM GPVWQQMADK
560 570 580 590 600
LQDFNVLSYL SSHDTRLFRE GGDNTAELLL LSPGAVQIFY GDESARPLGP
610 620 630 640 650
TGSDPLQGTR SDMNWQDVSG KSAMTVAHWQ RISQFRARHP AVGAGQQTTL
660 670
TLKQGYGFVR QYGDDTVMVV WAGRR
Length:675
Mass (Da):75,691
Last modified:September 20, 2011 - v1
Checksum:i630E1A184DA69868
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR877557 Genomic DNA. Translation: CCC32309.1.
RefSeqiYP_004732065.1. NC_015761.1.

Genome annotation databases

EnsemblBacteriaiCCC32309; CCC32309; SBG_3258.
GeneIDi10968550.
KEGGisbg:SBG_3258.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR877557 Genomic DNA. Translation: CCC32309.1.
RefSeqiYP_004732065.1. NC_015761.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCC32309; CCC32309; SBG_3258.
GeneIDi10968550.
KEGGisbg:SBG_3258.

Phylogenomic databases

KOiK01176.
OMAiFNWHNAT.

Enzyme and pathway databases

BioCyciSBON218493:GJAH-3283-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43975 / DSM 13772 / NCTC 12419Imported.

Entry informationi

Entry nameiF8VMH6_SALBC
AccessioniPrimary (citable) accession number: F8VMH6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 20, 2011
Last sequence update: September 20, 2011
Last modified: March 31, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.