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Protein

RNA polymerase II transcription factor B subunit 2

Gene

SERLADRAFT_361686

Organism
Serpula lacrymans var. lacrymans (strain S7.9) (Dry rot fungus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase II transcription factor B subunit 2UniRule annotation
Gene namesi
ORF Names:SERLADRAFT_361686Imported
OrganismiSerpula lacrymans var. lacrymans (strain S7.9) (Dry rot fungus)Imported
Taxonomic identifieri578457 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeBoletalesConiophorineaeSerpulaceaeSerpula
Proteomesi
  • UP000008064 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Phylogenomic databases

InParanoidiF8NXU2.
KOiK03144.
OrthoDBiEOG092C3703.

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 1 hit.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.
TIGRFAMsiTIGR00625. tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

F8NXU2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSLTTQSET LTPESIPHTL LPFLQSQSQN TLTRLYQRPS SCFSIFRLTG
60 70 80 90 100
PLERQIIMNL LWLESAIPIA TMSAWVIREG KKLYDAALTT LANLHILPQS
110 120 130 140 150
NVKLALNPTF KASFRQAITG GGNSSSFGVP AEKDDKRSTN TVETLDAYAL
160 170 180 190 200
ERWETILHYM VSSGQGSLPT KPSQGVLYLL QRSGLMTQNH GSALQITSAG
210 220 230 240 250
FQFLLHTPHD QLWDLLLQYL HMAEERQMDL VEVLSFLFML STMDLGREYS
260 270 280 290 300
TEGLSETQKA MLEDLRDYGL VWQRKATSKR FSPTRLATTL TSSCPPLPTS
310 320 330 340 350
TGTSGGPQSQ GFIVLETNYR IYAYTDKPLQ TAVLNLFITM KYRFPNLVVG
360 370 380 390 400
MLTRESVKKA LSNGISAEQI ISYLTTHAHP QMRKNNPLLP VTVQDQIRLW
410 420 430 440 450
ELERNRLKSE EGYLYKDFGS HADYEYVLNY AKQLDVVLWE NTSRRCFFGS
460
LDGHTNIRGF IERRTNGAV
Length:469
Mass (Da):53,010
Last modified:September 21, 2011 - v1
Checksum:i92E5D652DEA1EEAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL945434 Genomic DNA. Translation: EGO24758.1.
RefSeqiXP_007318777.1. XM_007318715.1.

Genome annotation databases

EnsemblFungiiEGO24758; EGO24758; SERLADRAFT_361686.
GeneIDi18809863.
KEGGisla:SERLADRAFT_361686.

Similar proteinsi

Entry informationi

Entry nameiF8NXU2_SERL9
AccessioniPrimary (citable) accession number: F8NXU2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 7, 2017
This is version 19 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported