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Protein
Submitted name:

Alpha-amylase

Gene

amyL

Organism
Streptococcus thermophilus JIM 8232
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi103Calcium 1UniRule annotation1
Metal bindingi197Calcium 1UniRule annotation1
Metal bindingi205Calcium 2UniRule annotation1
Active sitei234NucleophileUniRule annotation1
Metal bindingi238Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei264Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:amyLImported
ORF Names:STH8232_1766Imported
OrganismiStreptococcus thermophilus JIM 8232Imported
Taxonomic identifieri1051074 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000000300 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF8LYU4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 392AamyInterPro annotationAdd BLAST389

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F8LYU4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNQTAMQYF EWYLPSDGQH WNNLAEDAQH LADLGISHVW MPPAFKATNK
60 70 80 90 100
DDVGYGVYDL FDLGEFDQKG TIRTKYGLKE EYLNAINQLK NVGIIPMADV
110 120 130 140 150
VLNHKAAADK LETFYVVEVD PEDRTKVISE PFEIEGWTHF TFDGRQKAYN
160 170 180 190 200
DFEWHWYHFN GTDFDAKRNK KGIYLIQGDN KGWAHNDLVD NENGNFDYLM
210 220 230 240 250
FANLDYRHPE VIENIYEWAD WFVETTGVQG FRMDAIKHID YFFMRNFIRD
260 270 280 290 300
VKEKQGQDFY VFGEFWNAKE EDNNTYLEKT ENRFDLVDVR LHYNLYDASL
310 320 330 340 350
KGADYDLTTI FEQTLVKNHP EHAVTFVENH DTQRGQALES TVEEWFKPSA
360 370 380 390 400
YALILLRKDG LPCLFYGDYY GIDGEFAQES FKEVLDTLLY ARKDLAYGEQ
410 420 430 440 450
TDYFDDPNCI GWTRSGNEDC TPLAVTISND AANNKSMEIG SDWAGQTFYD
460 470 480
ILGNCSDTVT IDEDGWGDFP VSEKSVSVWT IQD
Length:483
Mass (Da):56,111
Last modified:September 21, 2011 - v1
Checksum:i2B931B0AEA63D479
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR875178 Genomic DNA. Translation: CCC20431.1.
RefSeqiWP_011681482.1. NC_017581.1.

Genome annotation databases

EnsemblBacteriaiCCC20431; CCC20431; STH8232_1766.
GeneIDi3163852.
KEGGistu:STH8232_1766.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR875178 Genomic DNA. Translation: CCC20431.1.
RefSeqiWP_011681482.1. NC_017581.1.

3D structure databases

ProteinModelPortaliF8LYU4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCC20431; CCC20431; STH8232_1766.
GeneIDi3163852.
KEGGistu:STH8232_1766.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiF8LYU4_STRTR
AccessioniPrimary (citable) accession number: F8LYU4
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: February 15, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.