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F8LRC5 (F8LRC5_STRE8) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL CCB95895.1
Gene names
Name:amyS EMBL CCB95895.1
Ordered Locus Names:SALIVA_1589 EMBL CCB95895.1
OrganismStreptococcus salivarius (strain JIM8777) [Complete proteome] [HAMAP] EMBL CCB95895.1
Taxonomic identifier347253 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CCB95895.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8LRC5 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: F6875C9D73B00C0B

FASTA48355,664
        10         20         30         40         50         60 
MTNQTAMQYF EWYLPSDGQH WNNLAEDAQH LADLGISHVW MPPAFKATNK DDVGYGVYDL 

        70         80         90        100        110        120 
FDLGEFDQKG TVRTKYGLKE EYLNAINQLK EVGIVPMADV VLNHKAAADK LETFEVVEVD 

       130        140        150        160        170        180 
PEDRTQEISE PFEIEGWTHF TFDGRNKAYN DFEWHWYHFN GTDFDAKRNK SGIYLIQGDN 

       190        200        210        220        230        240 
KGWADNDLVD NENGNFDYLM YANLDYKHPE VIENIYEWAD WFVETTGVQG FRMDAIKHID 

       250        260        270        280        290        300 
SFFMRNFIRD VKEKQGQDFY VFGEFWNGNE EDNNTYLEKI EKRFDLVDVS LHNNLHKASL 

       310        320        330        340        350        360 
DGADYDLTTI FDHSLVKNHP EQAVTFVDNH DTQRGQALES TVEEWFKPAA YALILLREDG 

       370        380        390        400        410        420 
LPCLFYGDYY GIEGEFAQEN FQETLDTLLY ARKDLAYGEQ TDYFDNPNCI GWTRSGNEDG 

       430        440        450        460        470        480 
APLAVTISND AANSKSMEIG SDWAGQTFYD ILGNCSDTVT IDEDGWGDFP VSEKSVSVWT 


IQD 

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References

[1]"Complete genome sequence of the commensal Streptococcus salivarius strain JIM8777."
Guedon E., Delorme C., Pons N., Cruaud C., Loux V., Couloux A., Gautier C., Sanchez N., Layec S., Galleron N., Almeida M., van de Guchte M., Kennedy S.P., Ehrlich S.D., Gibrat J.F., Wincker P., Renault P.
J. Bacteriol. 193:5024-5025(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JIM8777 EMBL CCB95895.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR873482 Genomic DNA. Translation: CCB95895.1.
RefSeqYP_006070730.1. NC_017595.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCB95895; CCB95895; SALIVA_1589.
GeneID12912202.
KEGGstj:SALIVA_1589.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMAFFHWYYP.

Enzyme and pathway databases

BioCycSSAL347253:GLLH-1572-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8LRC5_STRE8
AccessionPrimary (citable) accession number: F8LRC5
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: January 22, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)