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Protein
Submitted name:

DNA polymerase LigD, polymerase domain-containing protein

Gene

SNE_A12840

Organism
Simkania negevensis (strain ATCC VR-1471 / Z)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSNEG331113:GHY3-1310-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain-containing proteinImported
Gene namesi
Ordered Locus Names:SNE_A12840Imported
OrganismiSimkania negevensis (strain ATCC VR-1471 / Z)Imported
Taxonomic identifieri331113 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesSimkaniaceaeSimkania
ProteomesiUP000000496 Componenti: Chromosome gsn.131

Interactioni

Protein-protein interaction databases

STRINGi331113.SNE_A12840.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285. LUCA.
ENOG4105DQE. Bacteria.

Sequencei

Sequence statusi: Complete.

F8L8M2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFKNQLAYI LKQLQKLVLC NNKETLKYLA NQACITPHIW LSRSDNLDCP
60 70 80 90 100
DQMIFDLDPP GNDFSLVLEA ARDLREVLEK GCKLKTFVMT TGSKGLHVVV
110 120 130 140 150
PIKPAHTFDE VRNYAKEIAA FLVEQKMGKY TLNPRKTERG RKLFIDYLRN
160 170
GYAQTSVASY AVRSLDGAPQ SQCLLTGVR
Length:179
Mass (Da):20,271
Last modified:September 21, 2011 - v1
Checksum:i07B24F9C5B6EA458
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR872582 Genomic DNA. Translation: CCB89161.1.
RefSeqiWP_013943628.1. NC_015713.1.

Genome annotation databases

EnsemblBacteriaiCCB89161; CCB89161; SNE_A12840.
KEGGisng:SNE_A12840.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR872582 Genomic DNA. Translation: CCB89161.1.
RefSeqiWP_013943628.1. NC_015713.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi331113.SNE_A12840.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCB89161; CCB89161; SNE_A12840.
KEGGisng:SNE_A12840.

Phylogenomic databases

eggNOGiCOG3285. LUCA.
ENOG4105DQE. Bacteria.

Enzyme and pathway databases

BioCyciSNEG331113:GHY3-1310-MONOMER.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Unity in variety -- the pan-genome of the Chlamydiae."
    Collingro A., Tischler P., Weinmaier T., Penz T., Heinz E., Brunham R.C., Read T.D., Bavoil P.M., Sachse K., Kahane S., Friedman M.G., Rattei T., Myers G.S.A., Horn M.
    Mol. Biol. Evol. 0:0-0(2011)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Z.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1471 / ZImported.

Entry informationi

Entry nameiF8L8M2_SIMNZ
AccessioniPrimary (citable) accession number: F8L8M2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: December 9, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.