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F8KYR4 (F8KYR4_PARAV) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PUV_10690 EMBL CCB86019.1
OrganismParachlamydia acanthamoebae (strain UV7) [Complete proteome] [HAMAP] EMBL CCB86019.1
Taxonomic identifier765952 [NCBI]
Taxonomic lineageBacteriaChlamydiaeChlamydialesParachlamydiaceaeParachlamydia

Protein attributes

Sequence length794 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCB86019.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8KYR4 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 78C11C0FA3131AD6

FASTA79491,768
        10         20         30         40         50         60 
MSLGEYRSKR DLNKSKEPSA GKNKRSDALN FCIQKHAARR LHYDFRLEYK GVLLSWAVPK 

        70         80         90        100        110        120 
GPSLDPYDKR LAIQVEDHPL DYQYFEGTIP KGNYGAGKVE IWDRGTYTVP HVTTREEIEK 

       130        140        150        160        170        180 
YLTIGLKKGH FAVILHGEKL QGEFVFQKLK QDAEDTAWLL IKKEDAFATE TDHDKPAKQV 

       190        200        210        220        230        240 
KMPEFVTPML ATLADHPFSS EDWLFEIKWD GYRALAFIDP NNVQLKSRNR ILLNDRFPVI 

       250        260        270        280        290        300 
VDSLKKVKDK VIFDGELVVL DSAGKSDFQL MQNYQKDHAG VLYYYVFDLL YKDGQDLRNL 

       310        320        330        340        350        360 
PLIERKNLLK KLLKELNLPL IRYSDHIVKD GEDFYKEAVK NKLEGIIGKK VTSTYQSRRS 

       370        380        390        400        410        420 
QDWVKIKTAL RQEVVIGGFT EPRGSRKKFG ALLVGVYDDQ GELHYVGHVG GGFTDELLED 

       430        440        450        460        470        480 
VYKQLLPLSQ KKSPFKNIPK PNMPVTWIKP KLVCEVSFAE WTKDDIMRQP IFRGLRIDKN 

       490        500        510        520        530        540 
PKEVKKEIPT ASEEKKGRTS KRQELELTNL DKLYWPKEKY TKGDLIAYYQ KVAPYLLPYL 

       550        560        570        580        590        600 
RNRPITLHRF PDGIEGKDFY QKNIDFSHPD WLKTFPVQHE GKVDHYLMIS DLRSLLYAVN 

       610        620        630        640        650        660 
LGSIDLHPFT SRCKNLEKPD YCIIDLDPHD IAFEKVIEIA SATHELLERA KIKNYCKTSG 

       670        680        690        700        710        720 
GKGLHIFIPL HAKYDYEQSK EFAHVIALCI HKQFPTITSV ERSPQSRPKK IYLDYLQNRA 

       730        740        750        760        770        780 
LQTIVAPYSV RPRPGALVST PLLWEEVKPG LDPKDFDIHT ILKRLDKMGD IFKPILGGGV 

       790 
NMQTALNRLK KMFI 

« Hide

References

« Hide 'large scale' references
[1]"Unity in variety -- the pan-genome of the Chlamydiae."
Collingro A., Tischler P., Weinmaier T., Penz T., Heinz E., Brunham R.C., Read T.D., Bavoil P.M., Sachse K., Kahane S., Friedman M.G., Rattei T., Myers G.S.A., Horn M.
Mol. Biol. Evol. 0:0-0(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: UV7.
[2]"Unity in variety--the pan-genome of the Chlamydiae."
Collingro A., Tischler P., Weinmaier T., Penz T., Heinz E., Brunham R.C., Read T.D., Bavoil P.M., Sachse K., Kahane S., Friedman M.G., Rattei T., Myers G.S., Horn M.
Mol. Biol. Evol. 28:3253-3270(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UV7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR872580 Genomic DNA. Translation: CCB86019.1.
RefSeqYP_004651873.1. NC_015702.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCB86019; CCB86019; PUV_10690.
GeneID10863836.
KEGGpuv:PUV_10690.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPACA765952:GH3O-1088-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8KYR4_PARAV
AccessionPrimary (citable) accession number: F8KYR4
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)