F8KYR4 (F8KYR4_PARAV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase-like protein Rv0938/MT0965 EMBL CCB86019.1

Gene names

Ordered Locus Names:

PUV_10690 EMBL CCB86019.1

Organism

Parachlamydia acanthamoebae (strain UV7) [Complete proteome] [HAMAP] EMBL CCB86019.1

Taxonomic identifier

765952 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Chlamydiae/Verrucomicrobia group › Chlamydiae › Chlamydiia › Chlamydiales › Parachlamydiaceae › Parachlamydia › Parachlamydia acanthamoebae

Protein attributes

Sequence length	794 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CCB86019.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8KYR4 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 78C11C0FA3131AD6	FASTA	794	91,768
	10 20 30 40 50 60 MSLGEYRSKR DLNKSKEPSA GKNKRSDALN FCIQKHAARR LHYDFRLEYK GVLLSWAVPK 70 80 90 100 110 120 GPSLDPYDKR LAIQVEDHPL DYQYFEGTIP KGNYGAGKVE IWDRGTYTVP HVTTREEIEK 130 140 150 160 170 180 YLTIGLKKGH FAVILHGEKL QGEFVFQKLK QDAEDTAWLL IKKEDAFATE TDHDKPAKQV 190 200 210 220 230 240 KMPEFVTPML ATLADHPFSS EDWLFEIKWD GYRALAFIDP NNVQLKSRNR ILLNDRFPVI 250 260 270 280 290 300 VDSLKKVKDK VIFDGELVVL DSAGKSDFQL MQNYQKDHAG VLYYYVFDLL YKDGQDLRNL 310 320 330 340 350 360 PLIERKNLLK KLLKELNLPL IRYSDHIVKD GEDFYKEAVK NKLEGIIGKK VTSTYQSRRS 370 380 390 400 410 420 QDWVKIKTAL RQEVVIGGFT EPRGSRKKFG ALLVGVYDDQ GELHYVGHVG GGFTDELLED 430 440 450 460 470 480 VYKQLLPLSQ KKSPFKNIPK PNMPVTWIKP KLVCEVSFAE WTKDDIMRQP IFRGLRIDKN 490 500 510 520 530 540 PKEVKKEIPT ASEEKKGRTS KRQELELTNL DKLYWPKEKY TKGDLIAYYQ KVAPYLLPYL 550 560 570 580 590 600 RNRPITLHRF PDGIEGKDFY QKNIDFSHPD WLKTFPVQHE GKVDHYLMIS DLRSLLYAVN 610 620 630 640 650 660 LGSIDLHPFT SRCKNLEKPD YCIIDLDPHD IAFEKVIEIA SATHELLERA KIKNYCKTSG 670 680 690 700 710 720 GKGLHIFIPL HAKYDYEQSK EFAHVIALCI HKQFPTITSV ERSPQSRPKK IYLDYLQNRA 730 740 750 760 770 780 LQTIVAPYSV RPRPGALVST PLLWEEVKPG LDPKDFDIHT ILKRLDKMGD IFKPILGGGV 790 NMQTALNRLK KMFI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Unity in variety -- the pan-genome of the Chlamydiae." Collingro A., Tischler P., Weinmaier T., Penz T., Heinz E., Brunham R.C., Read T.D., Bavoil P.M., Sachse K., Kahane S., Friedman M.G., Rattei T., Myers G.S.A., Horn M. Mol. Biol. Evol. 0:0-0(2011) Cited for: NUCLEOTIDE SEQUENCE. Strain: UV7.
[2]	"Unity in variety--the pan-genome of the chlamydiae." Collingro A., Tischler P., Weinmaier T., Penz T., Heinz E., Brunham R.C., Read T.D., Bavoil P.M., Sachse K., Kahane S., Friedman M.G., Rattei T., Myers G.S., Horn M. Mol. Biol. Evol. 28:3253-3270(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: UV7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FR872580 Genomic DNA. Translation: CCB86019.1.
RefSeq	YP_004651873.1. NC_015702.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCB86019; CCB86019; PUV_10690.
GeneID	10863836.
KEGG	puv:PUV_10690.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	PACA765952:GH3O-1088-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR014144. LigD_PE_domain. IPR014145. LigD_pol. IPR012340. NA-bd_OB-fold. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8KYR4_PARAV

Accession

Primary (citable) accession number: F8KYR4

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)