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F8KYR4

- F8KYR4_PARAV

UniProt

F8KYR4 - F8KYR4_PARAV

Protein
Submitted name:

Putative DNA ligase-like protein Rv0938/MT0965

Gene

PUV_10690

Organism
Parachlamydia acanthamoebae (strain UV7)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPACA765952:GH3O-1088-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligase-like protein Rv0938/MT0965Imported
    Gene namesi
    Ordered Locus Names:PUV_10690Imported
    OrganismiParachlamydia acanthamoebae (strain UV7)Imported
    Taxonomic identifieri765952 [NCBI]
    Taxonomic lineageiBacteriaChlamydiaeChlamydialesParachlamydiaceaeParachlamydia
    ProteomesiUP000000495: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiNGLPDFQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8KYR4-1 [UniParc]FASTAAdd to Basket

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    MSLGEYRSKR DLNKSKEPSA GKNKRSDALN FCIQKHAARR LHYDFRLEYK    50
    GVLLSWAVPK GPSLDPYDKR LAIQVEDHPL DYQYFEGTIP KGNYGAGKVE 100
    IWDRGTYTVP HVTTREEIEK YLTIGLKKGH FAVILHGEKL QGEFVFQKLK 150
    QDAEDTAWLL IKKEDAFATE TDHDKPAKQV KMPEFVTPML ATLADHPFSS 200
    EDWLFEIKWD GYRALAFIDP NNVQLKSRNR ILLNDRFPVI VDSLKKVKDK 250
    VIFDGELVVL DSAGKSDFQL MQNYQKDHAG VLYYYVFDLL YKDGQDLRNL 300
    PLIERKNLLK KLLKELNLPL IRYSDHIVKD GEDFYKEAVK NKLEGIIGKK 350
    VTSTYQSRRS QDWVKIKTAL RQEVVIGGFT EPRGSRKKFG ALLVGVYDDQ 400
    GELHYVGHVG GGFTDELLED VYKQLLPLSQ KKSPFKNIPK PNMPVTWIKP 450
    KLVCEVSFAE WTKDDIMRQP IFRGLRIDKN PKEVKKEIPT ASEEKKGRTS 500
    KRQELELTNL DKLYWPKEKY TKGDLIAYYQ KVAPYLLPYL RNRPITLHRF 550
    PDGIEGKDFY QKNIDFSHPD WLKTFPVQHE GKVDHYLMIS DLRSLLYAVN 600
    LGSIDLHPFT SRCKNLEKPD YCIIDLDPHD IAFEKVIEIA SATHELLERA 650
    KIKNYCKTSG GKGLHIFIPL HAKYDYEQSK EFAHVIALCI HKQFPTITSV 700
    ERSPQSRPKK IYLDYLQNRA LQTIVAPYSV RPRPGALVST PLLWEEVKPG 750
    LDPKDFDIHT ILKRLDKMGD IFKPILGGGV NMQTALNRLK KMFI 794
    Length:794
    Mass (Da):91,768
    Last modified:September 21, 2011 - v1
    Checksum:i78C11C0FA3131AD6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FR872580 Genomic DNA. Translation: CCB86019.1.
    RefSeqiYP_004651873.1. NC_015702.1.

    Genome annotation databases

    EnsemblBacteriaiCCB86019; CCB86019; PUV_10690.
    GeneIDi10863836.
    KEGGipuv:PUV_10690.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FR872580 Genomic DNA. Translation: CCB86019.1 .
    RefSeqi YP_004651873.1. NC_015702.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCB86019 ; CCB86019 ; PUV_10690 .
    GeneIDi 10863836.
    KEGGi puv:PUV_10690.

    Phylogenomic databases

    KOi K01971.
    OMAi NGLPDFQ.

    Enzyme and pathway databases

    BioCyci PACA765952:GH3O-1088-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Unity in variety -- the pan-genome of the Chlamydiae."
      Collingro A., Tischler P., Weinmaier T., Penz T., Heinz E., Brunham R.C., Read T.D., Bavoil P.M., Sachse K., Kahane S., Friedman M.G., Rattei T., Myers G.S.A., Horn M.
      Mol. Biol. Evol. 0:0-0(2011)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: UV7.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: UV7Imported.

    Entry informationi

    Entry nameiF8KYR4_PARAV
    AccessioniPrimary (citable) accession number: F8KYR4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3