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Protein
Submitted name:

Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase

Gene

HBZC1_12340

Organism
Helicobacter bizzozeronii (strain CIII-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:HBZC1_12340Imported
OrganismiHelicobacter bizzozeronii (strain CIII-1)Imported
Taxonomic identifieri1002804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000008387 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF8KTQ0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8KTQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFSLFWDIII QEKPIKAGVF GGLGICLVSC YTIQLENKTK GSIMGDLLSR
60 70 80 90 100
RLQATPKGIG IVCDWFVQEA QNATLKSTDG REFIDFAGGI AVLNVGHRHP
110 120 130 140 150
RVIEAVKKQL EHFTHSAYQV SPYESYVALA EKINALAPIE GAKKTCFFTT
160 170 180 190 200
GGEATENAIK IAKAHTKRYG VIAFGGSFHG RTSMAVSMTG KVVPYKAELG
210 220 230 240 250
VGNPGVYHAY YPSALHGVSV ADSMKSLEHI CKSSISPLDV AAIIFEPVQG
260 270 280 290 300
EGGFNPAPVE FVTELREFCN THGIVLIADE VQTGFARTGK TFAMEHFKVS
310 320 330 340 350
PDLICMAKSL GGGLPLSGIV GKAEIMDAPS PGGLGGTYAG SPLATAAALE
360 370 380 390 400
VLEIIKEEKL NERAQNLGAQ LTQKLQTLQQ EIKEIAQVRG LGSMVAMELF
410 420 430 440
KEGKPSPDLA KGVQKEAMDQ GLLLLTCRGL WECDSLPLSA HHPPRAI
Length:447
Mass (Da):47,924
Last modified:September 20, 2011 - v1
Checksum:i7E605BD2BFFC6E8C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR871757 Genomic DNA. Translation: CCB80220.1.
RefSeqiYP_004607932.1. NC_015674.1.

Genome annotation databases

EnsemblBacteriaiCCB80220; CCB80220; HBZC1_12340.
KEGGihbi:HBZC1_12340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR871757 Genomic DNA. Translation: CCB80220.1.
RefSeqiYP_004607932.1. NC_015674.1.

3D structure databases

ProteinModelPortaliF8KTQ0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCB80220; CCB80220; HBZC1_12340.
KEGGihbi:HBZC1_12340.

Phylogenomic databases

KOiK00823.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Helicobacter bizzozeronii strain CIII-1, an isolate from human gastric mucosa."
    Schott T., Rossi M., Hanninen M.L.
    J. Bacteriol. 193:4565-4566(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CIII-1Imported.

Entry informationi

Entry nameiF8KTQ0_HELBC
AccessioniPrimary (citable) accession number: F8KTQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 20, 2011
Last sequence update: September 20, 2011
Last modified: March 31, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.