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F8KTQ0 (F8KTQ0_HELBC) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL CCB80220.1
Gene names
Ordered Locus Names:HBZC1_12340 EMBL CCB80220.1
OrganismHelicobacter bizzozeronii (strain CIII-1) [Complete proteome] [HAMAP]
Taxonomic identifier1002804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length447 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
F8KTQ0 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 7E605BD2BFFC6E8C

FASTA44747,924
        10         20         30         40         50         60 
MFSLFWDIII QEKPIKAGVF GGLGICLVSC YTIQLENKTK GSIMGDLLSR RLQATPKGIG 

        70         80         90        100        110        120 
IVCDWFVQEA QNATLKSTDG REFIDFAGGI AVLNVGHRHP RVIEAVKKQL EHFTHSAYQV 

       130        140        150        160        170        180 
SPYESYVALA EKINALAPIE GAKKTCFFTT GGEATENAIK IAKAHTKRYG VIAFGGSFHG 

       190        200        210        220        230        240 
RTSMAVSMTG KVVPYKAELG VGNPGVYHAY YPSALHGVSV ADSMKSLEHI CKSSISPLDV 

       250        260        270        280        290        300 
AAIIFEPVQG EGGFNPAPVE FVTELREFCN THGIVLIADE VQTGFARTGK TFAMEHFKVS 

       310        320        330        340        350        360 
PDLICMAKSL GGGLPLSGIV GKAEIMDAPS PGGLGGTYAG SPLATAAALE VLEIIKEEKL 

       370        380        390        400        410        420 
NERAQNLGAQ LTQKLQTLQQ EIKEIAQVRG LGSMVAMELF KEGKPSPDLA KGVQKEAMDQ 

       430        440 
GLLLLTCRGL WECDSLPLSA HHPPRAI 

« Hide

References

[1]"Genome sequence of Helicobacter bizzozeronii strain CIII-1, an isolate from human gastric mucosa."
Schott T., Rossi M., Hanninen M.L.
J. Bacteriol. 193:4565-4566(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CIII-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR871757 Genomic DNA. Translation: CCB80220.1.
RefSeqYP_004607932.1. NC_015674.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCB80220; CCB80220; HBZC1_12340.
GeneID10820370.
KEGGhbi:HBZC1_12340.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00823.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8KTQ0_HELBC
AccessionPrimary (citable) accession number: F8KTQ0
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)